Jeongeupia wiesaeckerbachi: R0382_003087
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Entry
R0382_003087 CDS
T11114
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jwk Jeongeupia wiesaeckerbachi
Pathway
jwk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0382_003087 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jwk03019
]
R0382_003087 (pnp)
03016 Transfer RNA biogenesis [BR:
jwk03016
]
R0382_003087 (pnp)
Enzymes [BR:
jwk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R0382_003087 (pnp)
Messenger RNA biogenesis [BR:
jwk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R0382_003087 (pnp)
Transfer RNA biogenesis [BR:
jwk03016
]
Prokaryotic type
tRNA degradation factors
R0382_003087 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
KH_1
S1
OB_RRP5_4th
KH_2
HrcA
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XVK51588
LinkDB
All DBs
Position
complement(3186814..3188958)
Genome browser
AA seq
714 aa
AA seq
DB search
MFNKIVKSFQYGKHTVTLETGEVARQASGAVVVSMDDTVVLVTVVAAKGVKPGQDFFPLT
VDYQERTYAAGKIPGGFFKREGRPSEKEILTSRLIDRPIRPLFPEGFFNEIQIIATVLSL
DPQIDSDIPAMIGASAALAISGLPFAGPIGAARVGYADGQYLLNPSKDELKTSQLDLVVA
GTDQAVLMVESEAKELSEEVMLGAVVFGHDELQKAINAINALADEVNPELFDWNEPVKNE
ALEVQVAEIAGEDLKQAFRIAQKQARSAKIGEAWDKVKAALITEGTDTLVANQIRGIFHD
MEAKIVRNQILDGYPRIDGRDTRTVRPITVRNGVLPRTHGSSLFTRGETQGLVVATLGTK
LDEQKIDALAGEYTDRFMLHYNFPPYSTGETGRVGTPKRREIGHGRLAKRALIAVLPSPE
EFAYTMRVVSEITESNGSSSMASVCGGCLALMDAGVPLKSHVAGIAMGLIKEGNRFAVLS
DILGDEDHLGDMDFKVAGTENGVTALQMDIKITGITKEIMKVALDQAQVGRAHILGIMKA
EVAGANTEVSQHAPRLYTMKINPEKIRDVIGKGGSVIRALTEETGTQIDIAEDGTITIAS
VSSEGADEAKRRIGEITAEVEIGKIYEGPVVKILDNNVGAIVSIMPGRDGLVHISQIANE
RIKNVSDYLKEGQVVRVKALEQDEKGRVRLSIKAVLNDEAAAAAPVAEPIEGAQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaacaaaatcgtgaaatcgttccagtacggcaaacataccgtgacgctggaaacg
ggcgaagtcgcccgccaggcctccggcgctgtcgtggtgtcgatggacgacaccgtggtg
ctggtgaccgtggttgccgccaagggcgtgaagcccggccaggacttcttcccgctcacg
gtcgattaccaagagcggacctatgccgccggcaagatcccgggtggcttcttcaagcgc
gaaggccgtccttccgaaaaggaaatcctgaccagccgcctgatcgatcgtccgatccgc
ccgctgtttccggaaggcttcttcaacgaaatccagatcattgcgaccgtgctgtcgctt
gatccgcaaatcgactccgacatcccggcgatgatcggcgcatcggctgcgctggccatt
tccggcctgccgttcgccggcccgattggtgccgcgcgcgtcggttacgccgatggccag
tacctgctcaacccgagcaaggacgaactgaagacgtcgcaactcgacctcgtcgttgcc
ggtaccgaccaagcggtgctgatggttgaatccgaagccaaggaattgtcggaagaagtc
atgctcggcgccgtggtcttcggtcacgacgaactgcaaaaagcgatcaacgcgatcaat
gcgctggccgacgaagtcaatccggagctgttcgactggaacgaaccggtcaagaacgaa
gcgcttgaagtccaggttgccgaaatcgccggtgaagacctcaagcaagccttccgcatt
gcccaaaaacaagcccgcagcgccaagattggcgaagcctgggacaaggtcaaggctgcg
ctgatcaccgaaggtaccgataccctcgtggccaaccagattcgtggcatttttcatgat
atggaagctaagatcgtgcgtaaccagattctcgacggttatccgcgtatcgacggtcgc
gacacccgcaccgtgcgcccgatcaccgtgcgcaacggcgtgctgccgcgcacccacggc
tcgtcgctgtttacccgcggcgaaacgcaaggtctggtcgttgccacgctgggcaccaag
ctcgacgaacagaagatcgatgcgctggccggtgaatacaccgaccgcttcatgctgcat
tacaacttcccgccgtactcgaccggtgaaaccggccgtgtcggcacgccgaagcgccgc
gaaatcggccacggccgtctggccaagcgcgcgctgatcgccgtgctgccgtcgccggaa
gaattcgcctacacgatgcgtgtggtgtcggaaatcaccgagtcgaacggttcgagctcg
atggcctcggtctgcggcggttgcctggcgctgatggatgccggcgtgccgctgaaaagc
cacgttgccggtatcgcgatgggtctgatcaaggaaggtaaccgtttcgccgtgctgtcg
gacatcctcggcgacgaagatcacctcggcgatatggacttcaaggtggctggtaccgaa
aacggcgtgaccgcgctgcagatggatatcaagatcactggcatcaccaaggaaatcatg
aaggtggcgctggatcaggcacaagttggccgtgcccacattctcggcatcatgaaggct
gaagtcgctggcgcgaacaccgaagtgtcgcagcacgcaccgcgtctttacaccatgaag
atcaatccggaaaaaatccgtgacgtgatcggcaaaggtggttcggtgattcgtgcgctg
accgaagaaaccggtacgcaaatcgatatcgccgaagatggcacgatcacgattgcatcg
gtgtcgtcggaaggcgcggacgaagccaagcgtcgtatcggcgaaatcactgctgaagtc
gaaatcggcaagatctacgaaggtccggtcgtgaagattctcgacaacaacgtcggtgca
atcgtctcgatcatgccgggtcgtgacggcctcgtgcacatcagccagatcgccaacgag
cgcatcaagaacgtgtcggactacctcaaggaaggtcaggtcgtgcgcgtgaaggcgctg
gaacaggacgagaagggccgtgttcgcctgtcgatcaaggctgtgctgaacgacgaagcc
gcagctgcagcaccggtggctgagccgatcgaaggcgcgcagtaa
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