Jeongeupia wiesaeckerbachi: R0382_003089
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Entry
R0382_003089 CDS
T11114
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jwk Jeongeupia wiesaeckerbachi
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jwk03016
]
R0382_003089 (truB)
Enzymes [BR:
jwk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R0382_003089 (truB)
Transfer RNA biogenesis [BR:
jwk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R0382_003089 (truB)
Prokaryotic type
R0382_003089 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HXXSHH
Motif
Other DBs
NCBI-ProteinID:
XVK51590
LinkDB
All DBs
Position
complement(3189552..3190463)
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AA seq
303 aa
AA seq
DB search
MAKRKIDGVLLLDKPFGITSNAAMMKCRWLLSAEKGGHTGVLDPFATGLLPLCFGEATKF
AQRMLDADKGYRATIRLGQVSTTLDGEGEITDSGEAPTDFALIERVLASFVGEIDQVPPM
HSALKHQGKALYEYARQGIEIERAARRITIYSIATVSFAGAELVIDVACSKGTYIRTLAD
DIGRALGCGAYLTGLRRTRTGGFSIEQSVSLDAYIAMSLEEREACLLPADVLVKDMPLLT
LDNDEVARCRNGMSIRRSAAMTEGVFRLYASAESGDNARFIGLGEVACDGVLRPKRLLAT
TGQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcaagatcgacggcgtgctgctgctcgacaagccttttggtatcaccagc
aatgcagcgatgatgaagtgccgctggctgctttccgccgaaaagggcggtcacaccggc
gtgctcgacccctttgcgaccggcctgttgccgctgtgtttcggcgaagcaaccaagttt
gcccagcgtatgctggatgccgacaagggctatcgcgcgacgattcggctcgggcaggta
tcgacgacgctcgacggcgaaggcgagattaccgatagcggcgaggcgccaaccgatttc
gcgctgattgagcgtgtgctggcgtcttttgttggcgagatcgatcaggtgccgccgatg
cattcggcgctcaagcaccaaggcaaggcgctgtacgagtatgcgcggcaaggcatcgaa
atcgaacgcgccgcccggcggatcacgatctactcgattgctaccgtctcgtttgccggc
gccgagctggtcattgatgtggcgtgctccaaagggacgtatatccgcacgctcgccgac
gatatcggtcgcgcgctcggttgcggcgcctatctgaccggactgcggcgcaccagaacc
ggcggattttcgatcgaacagtcggtatcactcgatgcatatatcgccatgtcgctcgaa
gagcgcgaagcctgcctgttgccggcggatgtgctggtaaaggacatgcccttgttgaca
ttggacaacgacgaagttgcacgttgtcgcaatggcatgagcattcgtcgttcggcagca
atgacggagggcgtgttccggctttacgcttcggctgaaagcggcgataatgcgcgattc
atcggtttgggcgaagtggcgtgcgatggtgtgctgcgccccaaacgtctgctggccact
accggccagtga
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