Jeongeupia wiesaeckerbachi: R0382_003134
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Entry
R0382_003134 CDS
T11114
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jwk Jeongeupia wiesaeckerbachi
Pathway
jwk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R0382_003134 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jwk03400
]
R0382_003134 (recD)
Enzymes [BR:
jwk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R0382_003134 (recD)
DNA repair and recombination proteins [BR:
jwk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R0382_003134 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
NTPase_1
T2SSE
AAA_28
zf-CCHC_3
SLFN-g3_helicase
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XVK51633
LinkDB
All DBs
Position
complement(3252381..3254402)
Genome browser
AA seq
673 aa
AA seq
DB search
MMSRSEMLALLARWAERGWLRELDRAFAVFLADEAADASPLLLLAAALASHQLGRGHVCL
DLQATLADSSFVLSLPPDGDDDAGLLLPAAVLANLDLAGWQVALQHPALVGNGAGCSPLV
LAGARLYLRRYWQYECDVRAAIEARLARTAELRAGLPLAALKQALDALFPPADHAGADWQ
KLACALAAGNAFSIVTGGPGTGKTTTVVRLLALLQSLALGGGDARPLRIRLAAPTGKAAA
RLGESIAGAVQRLPLDGLAGGEAIRAAIPVEVTTLHRLLGSKPDSRHFRHHAAHPLALDL
LVIDEASMIDLEMMAAVLAALPASARLILLGDKDQLASVEAGAVLGELCQRAGDGHYWPV
TRDWLAAASGEHIAAALVDEGGTPLDQAVAMLRHSHRFSAASGIGQLAGAVNDGDVDAVQ
AVWTQGYSDLARIELGQGDAALRGLVIDGAAEHFLADGHRAAPVGYRHYLQIVAEHRPAA
HANQTAFDDWARAVLTAHGQFQLLCALRRGPWGVEGLNQRIAELLHAEGLLPAHQGWYAG
RPVLVTRNDYGLGLMNGDIGITLPAAGDDGARLRVAFPAGDGRIKWVLPSRLQAVETVFA
MTVHKSQGSEFTHAALLLPDRLNPVLTRELVYTGITRARHWFMLASAGPDWQVLKPAILR
QVQRASGLLAEPD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccgatccgagatgctggcgctgttggcgcgctgggccgagcgcggctggctg
cgcgagctggatcgcgcctttgccgtgtttctggccgatgaagcggccgatgcctcgccc
ttgctcttgcttgcggcggcgctggccagtcatcagctcggtcgcggccacgtctgcctt
gatctgcaggcgacactggccgacagcagcttcgtgctatcgctgccgccggatggcgat
gacgatgccggcttgttgctacctgcggcggtgctggccaacctcgatctggccggctgg
caggtggcgttgcagcacccggcgttggtcggcaacggcgcaggctgttcgcccttggtg
ctggccggcgcgcgactctatttgcgtcgctactggcagtacgaatgcgatgtgcgcgcg
gcgatcgaggcgcggctggcgcgtaccgccgagctgcgtgccggcttgccgctggcggcg
ctgaaacaggcgctggatgccctgttcccgccggcggatcatgcgggcgccgactggcag
aagctggcgtgcgcgctggccgccggcaacgcgttcagcatcgtcaccggcggcccgggt
accggcaagacgacgacggtcgtccggctgctggcgctgctgcaaagcctggcgctgggt
ggcggtgacgcgcgcccgctgcgcatccgtctggccgcgccgaccggcaaggccgcggcg
cggctcggcgagtcgatcgccggtgcggtgcagcggctgccgctggacggtctggctggc
ggcgaggccatccgcgcggcgattccggtcgaggtgacgacattgcaccgcttgctcggc
agcaagcccgacagccgccatttccgccatcatgcggcccacccgctggcgctggatctg
ctggtgatcgacgaagcgtcgatgatcgacctggaaatgatggccgccgtgctcgcggcg
ctgccggcttccgcgagactgatcctgctgggtgacaaggaccagctggcctcggttgaa
gccggcgcggtgctcggtgagctgtgccagcgcgccggcgatggccattactggccggtg
acgcgcgactggctggccgcggcaagcggcgagcacattgccgcggcgctggtcgacgaa
ggcggcacaccgctcgatcaggcggtcgcaatgttgcggcacagtcatcgcttttcggcc
gccagcggcatcggccaactggccggggcggtcaacgatggcgatgtcgatgcggtgcag
gcggtctggacgcagggctacagcgatctggcccggatcgagctggggcagggtgatgcg
gcattgcgcgggctggtcatcgacggcgcggcggaacattttctcgccgacggacaccgg
gctgcaccggtgggctatcgccactatctgcagatcgtggccgaacatcgcccggcggcg
catgcgaaccaaacggcgttcgacgactgggcgagggcggtgctgacggcccacggccag
ttccagttgctgtgcgcgctgcggcgcgggccctggggcgtcgaaggtctgaatcagcgc
atcgccgaactgctgcatgccgagggcttgttgccggcgcatcagggctggtacgccggg
cggccggtgctggtgactcggaatgattacggtctcggcttgatgaatggcgacatcggc
attacgctgcccgccgccggggatgacggcgcaaggctgcgcgttgccttcccggcaggc
gatggccggatcaaatgggtgttgccgagccggctgcaggcggtagaaacggtgttcgcg
atgacggtgcacaagtcgcagggctcggaattcacccatgcggccttgctgctgcccgac
cggctcaatccggtgctgacgcgcgagctggtttacaccggcatcacccgtgcgcggcac
tggttcatgctggcgagcgccggcccggactggcaggtgctgaagccggcgatcctgcgg
caggtgcagcgcgccagcggcttgctggccgagccggactga
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