Kitasatospora albolonga: B7C62_09660
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Entry
B7C62_09660 CDS
T05009
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kab
Kitasatospora albolonga
Pathway
kab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7C62_09660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kab03019
]
B7C62_09660
03009 Ribosome biogenesis [BR:
kab03009
]
B7C62_09660
Enzymes [BR:
kab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B7C62_09660
Messenger RNA biogenesis [BR:
kab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B7C62_09660
Ribosome biogenesis [BR:
kab03009
]
Prokaryotic type
rRNA processing factors
B7C62_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ARF72506
LinkDB
All DBs
Position
complement(2214692..2218921)
Genome browser
AA seq
1409 aa
AA seq
DB search
MPQSNEPVPHGNNEENTPGDKLPPRRRRRAASRPAGPPGGAVTPAAEDTAAPAGGTAAVE
TPAAAPEPVAETAPPARTRRRAVRKATAPAGAPESAEVVAEAAAPVAAATEAAAEEAPAE
EAPAPRTRRRAVRKATAPAGAPQAAEAVAVVETPAEPLAEAEEDEEPVAEAVEPEAAPEP
PAPRRRRVSRKATAPAGAPQAAEAAVIVEPVASADPEETVVKVEIPEAAAPAAEAPRGRT
RRRASAPAGAPQAAATEAVNEPAVEPSSEPAEEAPAPRGRRRASRKASAPAGAPQVTEPA
AVEEPAGAGESLPAAVAEELAAEVEEVEEAAPRGRQRRRATAAAGTPEFTARAEEPSRKG
RRAARPAVAVFQAPVFAEPMFQTPETAAAAAAAAGSSSPYDEVEEAEEQQPAEAAQSTAP
AEAAPQGGSRRRRRRRGEAAEPEQTAAPAAPVEEPADEAPEAEADEHEGEDTDEYGDRPS
RRRRRGGRRRRRGEASDTDEAEQQHADEAPVPSRAEAEAPAQEADEEDDGDNDSAASGSS
SSRRRRRRRRRSGEGAAETDNGTDDPERTVVKVREPRKKEEREPGTGFDEVQSIKGSTRM
EAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQSGERTQIGVLEDNVLVEHY
VNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGMAHGPRRIE
TALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERSRLK
TILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQQQWEDIQKKAKGTSGSNAPTLLYGE
PDMTVRVVRDIFNEDFSKVIVSGDDAWETIHGYVSHVAPDLTERLSRWTSEVDVFATYRI
DEQLMKALDRKVYLPSGGSLVIDKTEAMVVVDVNTGKFTGQGGNLEETVTRNNLEAAEEI
VRQLRLRDLGGIVVVDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRK
RVGQGLLESFSETCVHCNGRGVIVHMEQPTSAGGGGGGKKSKKRRGGAGQDHEHEDHTAV
EPAETEAELAAEVAAPVAVEPEVTADEEFYSSPAEAEAAASRRGRRRASRKASAPAGAPK
AEAPVAEASAPVVEAEPEPVADTPEPQAPEVPVAAEAPVAQEAAEVPEAAPQGRTRRRAT
RKASAPAGSPKQAEPAVPVQPAEPATEPVAVEDPVVEAAPVQETPATPEVPETPEAPEAP
EAEAPKEAAPPRARRRVTRKVTAPAGSPTGAEDTAVVVVEAKAPEADAPQADAPQADAPQ
ADAPQATAPEAGASDEAVPAKKTARKAAAKKAPAKKAVAKKTAAKKTAAKKTTAKTAAKK
ATKKTVAAEQSSPSVTASTQSTDGDSSGN
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtcgaacgagcccgttccgcacgggaacaacgaagagaacacccccggggac
aagctgccgccgcgccgcaggcgccgcgccgcctcccgcccggcgggcccgcccgggggc
gctgtgacccccgccgccgaggacaccgccgcaccggccggcgggaccgccgccgtggag
accccggccgccgcgcccgagcctgtcgcggagaccgcgccgcccgcccgtacacgccgc
cgcgccgtgcgcaaggcgaccgcgcccgcaggcgctccggagagcgccgaggtggtcgcc
gaggccgccgctccggtggccgccgcgaccgaggccgccgctgaggaagccccggccgag
gaggctccggcgccccgcacccgccgccgcgcggtccgcaaggcgacggctccggccggt
gccccgcaggccgccgaggccgtggcggttgtcgagaccccggccgagcccctcgccgag
gcggaggaggacgaggagccggtggccgaggccgtcgagcccgaggccgcccccgagccc
ccggccccgcgccgccgccgcgtctcccgtaaggccaccgcgcccgccggtgcgccgcag
gccgccgaggccgctgtgatcgtcgagccggtcgcgtccgccgaccccgaggagacggtc
gtcaaggtcgagatccccgaggccgccgcgcccgccgccgaagccccgcgcggccgtacc
cgccgtcgtgcctccgccccggccggtgccccgcaggccgctgctacggaagctgtgaac
gagcccgcggtggagccttcttccgagcccgccgaggaggccccggccccgcgcggccgt
cgccgtgcctcccgtaaggccagcgccccggccggtgccccgcaggtcaccgagccggcc
gccgtggaggagcccgccggggccggtgagagcctgcccgccgccgtcgccgaggagctc
gcggccgaggtggaggaggtcgaggaggccgccccgcgcggacgccagcgccgccgggcc
accgctgccgccgggacccccgagttcaccgcccgggccgaggagccgagccgcaagggc
cgccgcgccgcgcgccccgccgtcgccgtgttccaggccccggtcttcgccgagccgatg
ttccagacccccgagacggcggccgccgccgctgccgcggccggttcctcctccccgtac
gacgaggtcgaggaggccgaggagcagcagcccgccgaggccgcccagagcaccgcaccc
gccgaggccgcgccgcagggcggctcgcgccgccgtcgccgccgccgtggtgaggccgcc
gagcccgagcagaccgccgcgcccgccgccccggtggaggagcccgccgatgaggccccc
gaggccgaggcggacgagcacgagggcgaggacaccgacgagtacggcgaccgcccctcg
cgccgccgccgtcgcggtggccgccgtcgccgccgtggcgaggccagtgacacggacgag
gccgagcagcagcacgccgacgaggcgcccgtgccgtcccgcgccgaggccgaggctccg
gcccaggaggccgacgaggaggacgacggcgacaacgactccgccgcctccggttcgagc
agcagccgtcgtcgccgccgtcgccgtcgccgcagcggcgagggtgcggccgagaccgac
aacggcacggacgacccggagcgtacggtcgtcaaggtccgcgagccccgcaagaaggag
gagcgcgagccgggcaccggcttcgacgaggtccagtccatcaagggctcgacccgtatg
gaggccaagaagcagcgccgccgcgagggccgcgagcagggccgccgccgcgtcccgatc
atcaccgaggccgagttcctcgcccgccgcgaggccgtcgagcgcgtgatggtcgtccgc
cagagcggcgagcgcacccagatcggcgtcctcgaggacaacgtgctcgtcgagcactac
gtcaacaaggagcaggccaccagctacgtcggcaacgtctacctgggcaaggtgcagaac
gtcctgccctccatggaggccgccttcgtcgacatcggcaagggccgcaacgccgtcctg
tacgccggtgaggtcaacttcgaggcgctcggcatggcccacgggccgcgccgcatcgag
accgcgctcaagtccggccagtccgtcctggtccaggtgaccaaggacccgatcggccac
aagggcgcccgtctgacgagccaggtctccctgcccggccgctacctggtgtacgtgccc
gagggctcgatgaccgggatcagccgcaagctccccgacaccgagcgctcccgcctcaag
acgatcctcaagaagatcgtccccgaggacgcgggcgtcatcgtgcgcaccgccgccgag
ggcgccagcgaggacgagctgcgccgtgacgtcgagcggctccagcagcagtgggaggac
atccagaagaaggcgaagggcaccagcggctccaacgcgccgacgctgctctacggcgag
ccggacatgaccgtccgggtcgtccgcgacatcttcaacgaggacttctccaaggtcatc
gtcagcggtgacgacgcctgggagaccatccacggttacgtctcgcacgtcgcgcccgac
ctcaccgagcggctctcccgctggacctccgaggtcgacgtcttcgcgacgtaccgcatc
gacgagcagctgatgaaggcgctggaccgcaaggtctacctgcccagcggcggttcgctg
gtgatcgacaagaccgaggcgatggtcgtggtcgacgtcaacaccggcaagttcaccggc
cagggcggcaacctggaggagaccgtcaccaggaacaacctggaggcggccgaggagatc
gtgcgccagctgcggctgcgcgacctcggcggcatcgtcgtggtcgacttcatcgacatg
gtgctggagtccaaccgggacctcgtcctgcgccgcctcctggagtgcctgggccgcgac
cgcaccaagcaccaggtggccgaggtcacctcgctgggcctggtccagatgacccgcaag
cgggtgggccaggggctgctggagtccttctccgagacctgcgtccactgcaacgggcgc
ggtgtgatcgtccacatggagcagccgacgtccgccggtggcggcggtggcggcaagaag
tccaagaagcgccggggcggtgcgggccaggaccacgagcacgaggaccacacggccgtc
gagcctgcggagacggaggccgaactggccgccgaggtcgccgccccggtggcggtggag
cccgaggtcaccgccgacgaggagttctacagcagcccggccgaggccgaggcggctgcc
tcgcgccgtggccgccgcagggcgtcccgcaaggcgtcggccccggccggtgcgccgaag
gccgaggctccggtggcggaggcgtccgctccggtcgttgaggcggagccggagccggtt
gccgacacgcccgagccgcaggctccggaggttccggttgctgctgaggctccggtggcc
caggaggccgccgaggtccccgaggccgcgccccagggccgtacgcgccgtcgcgccacc
cggaaggcgtccgccccggcgggttcgccgaagcaggccgagcccgcggtgccggtgcag
cccgccgagcccgccacggagccggtcgccgtcgaggacccggtcgtcgaggccgctccc
gtacaggagacgcccgcgacacctgaggtgcctgaaacgcccgaggcgcccgaggcgcct
gaggcggaggcccccaaggaggccgctccgccgcgtgcccggcgccgggtgacccgtaag
gtcaccgctccggcgggttcgcccaccggtgcggaggacacggcggtcgtcgtggtcgag
gcgaaggcacctgaggccgacgccccgcaggccgacgccccgcaggccgacgccccgcag
gccgacgccccgcaggcgacggctccggaggctggtgcgtccgacgaagcggtcccggcg
aagaagacggcccgcaaggccgccgccaagaaggctccggcgaagaaggcggtggccaag
aagacggccgccaagaagaccgccgcgaagaagacgacggcgaagacggccgccaagaag
gcgacgaagaagaccgtcgccgccgagcagtcgtcgccttccgtaaccgcttcgacgcag
tccaccgacggggactcgtcgggcaactga
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