Kitasatospora albolonga: B7C62_18470
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Entry
B7C62_18470 CDS
T05009
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kab
Kitasatospora albolonga
Brite
KEGG Orthology (KO) [BR:
kab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kab03019
]
B7C62_18470
Enzymes [BR:
kab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B7C62_18470
Messenger RNA biogenesis [BR:
kab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B7C62_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_19
AAA_22
nSTAND3
AAA_16
T2SSE
NACHT
PhoH
DUF6139
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
ARF74011
LinkDB
All DBs
Position
complement(4239964..4243896)
Genome browser
AA seq
1310 aa
AA seq
DB search
MSTSFADLQSQLGQLSLRDANRLGRRLEGARRIRKPEARQSVLDEIAAEAGKAADRLASR
AARLPALSYPEELPVSQKKDEILEAIRDHQVVIVAGETGSGKTTQIPKICMELGRGVRGM
IGHTQPRRIAARTVAERVADELKTPLGETVGWKVRFTDQVNPESTYLKLMTDGILLAEIQ
TDRELLAYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKVVITSATIDPERFARHFGD
APIVEVSGRTYPVEVRYRPLLEEDSEDSDRDQITAICDAVDELSHEAPGDVLVFLSGERE
IRDTADALNKRNLRHTEVLPLYARLSHAEQHRVFQRHTGRRIVLATNVAETSLTVPGIKY
VIDPGNARISRYSHRTKVQRLPIERISQASANQRKGRCGRTSDGICIRLYSEDDFVTRPE
FTDPEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDPGEKDP
KKRLTPLGRKLSQLPVDPRLARMVIEADKNGCAREVMVIAAALSIQDPRERPSEKQTQAD
QQHARFKDETSDFLAYLNLWRYVREQQKERGSSSFRRMCKQEYLNFLRIREWQDIYAQLR
TVAKQMGITVEEPKGDASIPEQAVHVSLLSGLLSHIGLKDTEKNEYLGARSAKFAIFPGS
ALFKKQPRFVMSAELVETSRLWARVNARVEPEWIEPLAQHLLKRTYSEPHWEKDQAAVMA
YERVTLYGVPIIAQRKINFGRIDQEASRDLFIRNALVEGDWRTHHQFFHDNRKLLGEVEE
LEHRARRRDILVDDETLFDFYDQRIPEHIVSGAHFDSWWKHKKREEPDALDFERSMLINE
KAGAVTKDDYPDSWRQGKLKFKVTYQFEPGADADGVTVHIPLQVLNQVTSEGFDWQIPGL
REEVVTELIRSLPKPVRRHYVPAPNYADKFLDRAVPLQEPLPVTLARELQRMVGVPVTAD
DFDLSRVPDHLKITFRIVDERRRKVAEDKDLEALKLRLRPKARQALSKAAAATAGPSGES
IERSGLTDWTIGTLNQVFETRRAGQPVKAYPALVDQGDTVAVRLFDTAAEQQQAMWRGTR
RLILLNIPVNPAKFASDRLTNQQKLALSRNPHGSVQALFEDCATAAADRLIAAHGGPAWD
EKAFRTLYDKVRADLVDLTVRTIDQVQQVLAAWQACERRLKATTSPTLLANVTDVREQLA
RLVPPGFVTATGLRRLPDLMRYLVAADRRLQQMPTAVQRDTTRMAKVHEMQDEYAWLLEQ
LPQGRPVPQEVLDVRWMIEELRVSYFAHALGTAFPVSDKRIVKAIDALAP
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttcctttgccgatctccagtcccagctcggacagctctcgctccgtgacgcg
aaccggctcggccggcgcctcgaaggcgcgcgccgcatccgcaagcccgaggcccgccag
tccgtgctggacgagatcgcggccgaggcgggcaaggcggccgaccggctcgcgtcgcgc
gcggcccggctgcccgccctgtcgtatccggaagagctgccggtcagccagaagaaggac
gagatcctggaggcgatacgcgaccaccaggtcgtgatcgtcgccggggagaccgggtcc
gggaagaccacgcagatccccaagatctgtatggagctggggcgcggggtccggggcatg
atcgggcacacccagccccgccggatcgcggcgcgtacggtcgcggagcgggtcgcggac
gagctgaagactccgctcggcgagaccgtcggctggaaggtccgcttcaccgaccaggtg
aacccggagtcgacgtatctgaagctgatgacggacggcatcctgctcgccgagatccag
acggaccgcgagttgctggcgtacgacacgatcatcatcgacgaggcccacgagcggtcg
ctgaacatcgacttcctgctcggctatctggcccggctgctgccgcgccgccccgatctg
aaggtcgtcatcacctccgcgacgatcgatccggagcggttcgcccgccacttcggggac
gcgccgatcgtggaggtcagcgggcggacgtacccggtggaggtccgctaccggcctctc
ctcgaagaggacagcgaggactccgaccgcgaccagatcaccgcgatctgcgacgccgtc
gacgagctgagccacgaggcccccggtgacgtcctcgtcttcctctccggtgagcgcgag
atccgggacacggcggacgcgctgaacaagcggaacctcagacacaccgaggtgctcccc
ctctacgcgcgcctctcgcacgccgagcagcaccgcgtgttccagcgccacacgggacgc
cgcatcgtcctcgcgacgaacgtggccgagacctcgctgaccgtccccggcatcaagtac
gtgatcgacccgggcaacgcccggatctcccgctacagccaccgcaccaaggtccagcgg
ctgccgatcgagcggatctcccaggccagcgccaaccagcgcaagggccgctgcggccgt
acgtcggacggcatctgcatccggctctactcggaggacgacttcgtcacccggccggag
ttcaccgacccggagatcctgcggaccaacctggcctccgtcatcctccagatgaccgcc
gccgggctcggcgacatcgagaagttcccgttcatcgatccgccggaccaccgcaacatc
cgcgacggtgtgcagctgctccaggaactgggggcgctcgacccgggcgagaaggacccg
aaaaagaggctcacgcccctcggccgcaagctctcccagctgcccgtcgacccgcgcctg
gcccggatggtcatcgaggccgacaagaacggctgcgcccgcgaggtcatggtcatcgcc
gccgccctctccatccaggacccgcgcgagcggccctcggagaagcagacgcaggccgac
cagcagcacgcccggttcaaggacgagacgtccgacttcctggcgtacctgaacctgtgg
cgttacgtccgcgagcagcagaaggagcgtggctcgtcctcgttccgccggatgtgcaag
caggagtatctgaacttcctgcgcatccgcgaatggcaggacatctacgcgcagctgcgg
acggtcgccaagcagatgggcatcaccgtcgaagagcccaagggcgacgcgtcgatcccc
gagcaggcggtgcacgtctcgctgctctccgggctgctgtcgcacatcgggctgaaggac
accgagaagaacgagtacctgggcgcgcgcagcgccaagttcgcgatcttccccgggtcg
gcgctcttcaagaagcagccccggttcgtgatgtcggcggagctggtggagacctcccgg
ctctgggcgcgggtcaacgccagggtcgagcccgagtggatcgagccgctggcccagcac
ctgctgaagcgcacgtacagcgagccgcactgggagaaggaccaggccgcggtgatggcg
tacgaacgggtcacgctctacggggtgccgatcatcgcccagcgcaagatcaatttcggc
cgtatcgaccaggaagcctcgcgggacctgttcatccgcaacgccctggtcgagggcgac
tggcgcacccaccaccagttcttccacgacaaccgcaaactcctgggcgaggtcgaggag
ttggagcaccgcgcccggcgccgcgacatcctcgtggacgacgagacgctcttcgacttc
tacgatcagcggattcccgagcacatcgtctccggggcgcacttcgactcgtggtggaag
cacaagaagcgcgaggagccggacgcgctcgacttcgagcgctccatgctgatcaacgag
aaggccggggccgtcaccaaggacgactatccggactcctggcggcaggggaagctcaag
ttcaaggtgacgtaccagttcgagcccggcgcggacgcggacggcgtgaccgtccacatc
ccgctccaggtgctgaaccaggtcacctccgagggcttcgactggcagatcccggggctg
cgcgaggaggtcgtcaccgagctgatccgctcgctgccgaagccggtccgccggcactac
gtccccgcaccgaactacgcggacaagttcctcgaccgggcggtcccgctccaggagccg
ctgccggtcaccctggcccgggagctccagcggatggtcggggtgccggtcaccgccgac
gacttcgacctctcccgggtcccggaccacctgaagatcacgttccggatcgtcgacgag
cggcgccgcaaggtcgccgaggacaaggacctggaggcgctgaagctccggctgcgcccg
aaggcccgccaggcgctctccaaggccgccgcggcgaccgcggggccctccggcgagtcc
atcgagcgttcgggcctcacggactggacgatcggcacgctgaaccaggtcttcgagacg
cgtcgggccgggcagccggtgaaggcgtacccggccctcgtcgaccagggcgacaccgtc
gccgtacgcctcttcgacaccgcggccgagcagcagcaggccatgtggcgcggcacgcgg
cggctgatcctgctgaacatcccggtgaacccggcgaagttcgcctccgaccggctcacc
aaccagcagaagctggccctgtcccgcaatccgcacggctcggtgcaggccctcttcgag
gactgcgccaccgccgccgccgaccggctgatcgccgcgcacgggggcccggcgtgggac
gagaaggcgttccggacgctgtacgacaaggtccgcgccgatctggtggatctgaccgtc
cgcacgatcgaccaggtgcagcaggtgctggccgcctggcaggcgtgcgagcggcggctg
aaggcgaccaccagcccgacgctgctcgccaacgtcaccgacgtacgggagcagctggcc
cgtctcgtaccgcccggttttgttacggcgacggggctgcgccggctgcccgacctgatg
cgctacctggtcgcggccgaccggcggctccagcagatgccgacggccgtgcagcgggac
accacgcggatggcgaaggtccacgagatgcaggacgagtacgcgtggctgctcgaacag
ctcccgcaggggcggccggtgccgcaggaggtgctggacgtccgctggatgatcgaggag
ctgcgggtcagctacttcgcgcacgccctgggcaccgcgttccccgtctcggacaagcgg
atcgtgaaggcgatcgacgccctcgcaccctga
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