Kitasatospora albolonga: B7C62_21870
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Entry
B7C62_21870 CDS
T05009
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kab
Kitasatospora albolonga
Pathway
kab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B7C62_21870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kab03021
]
B7C62_21870
03400 DNA repair and recombination proteins [BR:
kab03400
]
B7C62_21870
Enzymes [BR:
kab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B7C62_21870
Transcription machinery [BR:
kab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B7C62_21870
DNA repair and recombination proteins [BR:
kab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B7C62_21870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ARF74580
UniProt:
A0ABC8BXI5
LinkDB
All DBs
Position
4948519..4952418
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQTENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGQLRDTKGE
GRAFGSTAEAIMAFDAGELALQSTVDIRFPVGTMPPRGWVPPVAEEGEPEYQPGDTFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVKGYEEQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLKIAVKG
ADGVLRKTDDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAKGRVRIEETEKTKKIVVTPDDGSDETAFPISKRARL
LVGEGDPVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cggacctggtcccacggcgaagtgaagaagccggagaccatcaactaccgcacgctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgttccctcgcgcctcggatacctgctggacctc
gcgccgaaggacctggaaaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgtcgtacccgcgacctgccgtccctggaggcgcacgtctccgtcgagcgccag
cagaccgagaaccgccgcgacgccgacctggaggcccgggccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtacgccgcaaggtgcgcgaaggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggtacgtacttcgacggctgcatgggcgccgccgcg
ctccagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacaagcccaagggcatggtgctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgtcgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctcctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagcccgccgacggccgcccggtcacgatgccgacccaggac
atggtcctcggtctgttcttcctgaccaccgacggccagctccgtgacaccaagggcgag
ggccgcgcgttcggctccacggccgaggcgatcatggcgttcgacgccggtgagctggcg
ctccagtccaccgtcgacatccgcttcccggtcggaaccatgccgccgcgcggctgggtg
ccgccggtcgccgaggagggcgagcccgagtaccagccgggcgacaccttccggctgcgc
accagcctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttccactgggcgacc
cgttcgggcgtcaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcaagggctacgaggagcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttccccaagaccaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatc
atccgcgaggaggactgcggcaccgaccgcggcctgaagctgaagatcgccgtcaagggc
gccgacggcgtgctccgcaagacggacgacgtcgagacctcggtctacgcccgtatgctc
gccgaggacgtcgtggtggacggcaaggtcatcgcgcctgccaacgtcgacctcggtgac
gtcctgatcgacgccctggtgggcgccggagtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgagtcgtcgagctcttcgaagcccgtacgccgaagggtgtcgccccg
atctccgaggccaagggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccgtctg
ctcgtgggcgagggcgacccggtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctcggccagcgtgcggtccaggtccacctggtcggcgaa
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgcggagctgcttccg
ggcgagctggtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcgtcgctcgccacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctgaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctctcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgtcccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
