Kitasatospora albolonga: B7C62_24735
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Entry
B7C62_24735 CDS
T05009
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kab
Kitasatospora albolonga
Pathway
kab03420
Nucleotide excision repair
kab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7C62_24735
03430 Mismatch repair
B7C62_24735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kab03400
]
B7C62_24735
Enzymes [BR:
kab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7C62_24735
DNA repair and recombination proteins [BR:
kab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7C62_24735
MMR (mismatch excision repair)
Other MMR factors
B7C62_24735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Serglycin
Motif
Other DBs
NCBI-ProteinID:
ARF75089
UniProt:
A0ABC8BXK9
LinkDB
All DBs
Position
5569736..5573365
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AA seq
1209 aa
AA seq
DB search
MSPRITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIAAGVTDPEVIDPDHPPGEPTISTYHAFAGRLL
TEHGLRIGLEPSTRLLADATRYQLAAKVLREAPGPYPALTRSFSTLVSDLLALDGELSEH
LVPPGRLAAYDTELLRALEHVRLSNEDLRKIPETAEARRSLLGLTERYRAAKRSRDLLDF
GDQIALSAELALTRPEVGAILRDEFRVVLLDEYQDTSVAQRLLLSALFGSGSGSGSGSGS
GSGNGSGTEPGAPGTSGAPTPGSGTAVDGTRPTGPTGHAVTAVGDPCQAIYGWRGASVAN
LDDFPEHFPHADGTPATRFSLSENRRSGGRLLQLANGLAEPLRAMHEGVEALRPAPGAER
DGVVRCALLTTHTEEIDWLADSLAHLVRTGTPPGEIAVLCRTAGDFPAIQAALVARGIPV
EVVGLAGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIGPRDLALLGRRARLLV
HRTAQGDDADPDRRLAEAVEGTDPAEVISLADALDTFLIAGDTADDGLPFSAEARVRFAR
LARELRDLRRSLADPLMDVLHRVLATTGLEVELSASPQALAARRRETLANFLDVAARFAA
LDGEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGQ
FPSGQSRDAWTAQAKVLPHALRGDAATLPALDASDGLNARGVKAFKEEMKEHQHTEELRL
GYVTFTRPRCLLLGSGHWWGPSQKKTRGPSAFLEALYEHCAAGHGEIEVWADKPAEDEEN
PALAAPETDLAWPLPLDATALTRRRAARDTVLAHLESLAVHGDERPPAHGPGPDGVPPHD
AAHEDEPPLEEAPFDEGWDWDALPTERPAETVPDTAPEPVRGSAPEAPPSEPPHIPAARH
PQEEPQDRPQEEPADRLTPEEARTLASWDRDLDALAGELRRARATVHDVLVPASLSATQL
LRLAEDPDAFAKELARPMPRPPQPAARRGTRFHAWVESRYEELPLPMLGPDELPGGDGSD
AEIADERDLAELKEAFERTTYARRTPYRVETPFQITLAGRVIRGRIDAVYRTGDRYEIVD
WKTTRHRTADPLQLAVYRLAWAELHDLPLSAVTATFLYVRSGETVHPQGLPGRAELERIL
LDEPVPGDG
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtgtctccacgcatcaccgatcccgagcagctcaaggagctcctcggcatccccttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcggggaagaccacggtgatggccgcacgggtggtgtggctcgtcggcaccggccag
gtcgcaccggagcaggtcctcggcctcaccttcaccaacaaggcggcgggcgagctcgcc
gagcgggtccgcaaggcgctgatcgccgccggggtcaccgaccccgaggtcatcgacccg
gaccacccgccgggcgagcccacgatctccacgtaccacgcgttcgccggccgcctcctc
accgagcacggcctccgcatcggactggagccctccacccgcctcctcgccgacgccacc
cgctaccagctcgcggccaaggtgctgcgcgaggccccgggcccgtatccggcgctcacc
cgctccttctccaccctcgtcagcgacctcctggcgctcgacggcgagctgtccgagcac
ctcgtgccccccggcaggctggcggcgtacgacaccgagctgctgcgcgccctggagcac
gtccggctcagcaacgaggacctgcgcaagatccccgagaccgccgaggcccgccgctcc
ctcctcggcctcaccgagcgctaccgggccgccaagcggagccgggacctcctggacttc
ggcgaccagatcgccctctccgccgagctggccctgacccggcccgaggtgggggcgatc
ctgcgggacgagttccgggtggtgctgctcgacgagtaccaggacacgtcggtggcccag
cggctgctgctctcggcgctgttcgggagcggcagtgggagtggcagcggcagtgggagt
gggagtgggaacggcagcggtacggagccgggggcgcccgggacgtccggcgcgcccacc
cccggctccggcacggccgtcgacgggacccggccgaccgggcccaccggccacgcggtg
accgccgtgggcgacccctgccaggcgatctacggctggcgcggcgcctccgtggccaac
ctcgacgacttccccgagcacttcccgcacgccgacggcacccccgccacccgcttcagc
ctcagcgagaaccggcgcagcggcggccggctcctccagctcgccaacggcctcgcggag
cccctgcgcgcgatgcacgagggcgtggaggcgctgcgccccgccccgggcgccgagcgg
gacggcgtggtccgctgcgccctgctgaccacccacaccgaagagatcgactggctcgcg
gactccctcgcccatctcgtccgcaccggcaccccgcccggtgagatcgccgtcctgtgc
cgcaccgccggggacttccccgcgatccaggcggccctggtcgcccggggcatcccggtc
gaggtggtcggcctcgccgggctgctgcacctgccggaggtggccgacctggtcgccgtc
tgcgaggtcctccaggacccgggcgccaacgcgtccctggttcgcctcctcaccggaccg
cgctggcgcatcggcccccgcgacctcgccctcctcggccgccgggcccgcctcctcgtc
caccggaccgcccagggggacgacgccgacccggaccggcggctggcggaggccgtcgag
ggcaccgacccggccgaggtgatatcgctcgcggacgccctggacaccttcctcatcgcg
ggggacacggcggacgacgggctgccgttctcggcggaggcccgcgtccgcttcgcccgg
ctcgcccgcgagctgcgcgacctgcgccgctcgctcgcggaccccctgatggacgtcctg
caccgggtcctggccaccaccggcctggaggtcgagctgtccgcgtccccgcaggcgctg
gccgcccgccgccgcgagaccctcgccaacttcctggacgtggcggcccggttcgccgcc
ctggacggcgaggcgtccctgctcgccttcctcggcttcctgcggaccgccgcgcagtac
gagaaggggctcgacaacgcgctgcccggcggcgagaacaccgtcaaggtcctcaccgcc
cacaagtccaagggcctggagtgggacgtggtcgccgtgcccggcctggtcaccggccag
ttccccagcggccagtcccgggacgcctggaccgcccaggccaaggtgctcccgcacgcc
ctgcgcggcgacgcggccaccctcccggccctggacgcctccgacgggctgaacgccagg
ggcgtcaaggcgttcaaggaggagatgaaggagcaccagcacacggaggagctgcgcctg
gggtacgtcaccttcacccgcccccgctgcctgctcctcggctccggccactggtggggc
ccgtcccagaagaagacgcgcggcccgtccgccttcctggaggcgctgtacgagcactgc
gcggcgggccacggcgagatcgaggtctgggcggacaagcccgccgaggacgaggagaac
ccggccctcgcggcacccgaaacggacctggcctggccgctcccgctcgacgccacggcc
ctcacccgccgccgcgccgcccgggacacggtgctggcccacctggagagcctggccgtc
cacggggacgagcggccaccggcgcacgggcccggacccgacggcgtaccgcctcatgac
gcggcccacgaggacgagccgcctctcgaggaggcaccgttcgacgagggctgggactgg
gacgcgctccccaccgaacgccccgcggaaaccgttccggacacggccccggagcccgta
cgggggtcggcaccggaggcacccccgagcgagcccccgcacatccccgccgcccgccac
ccccaggaagaaccgcaggaccggccccaggaagaaccggcggaccggctcacccccgag
gaggcccgcaccctcgcctcctgggaccgggatctcgacgccctcgccggggagctccgc
cgcgcccgcgccaccgtgcacgacgtcctcgtgcccgcctcgctctccgccacccagctg
ctgcgcctggccgaggaccccgacgcgttcgccaaggagctggcccggcccatgccccgg
ccgccgcagcccgccgcccgccggggcacccggttccacgcctgggtggagtcccggtac
gaggagctgccgctgcccatgctcggccccgacgagctgcccgggggcgacgggagcgac
gcggagatcgccgacgagcgcgacctcgccgaactgaaggaggcgttcgagcgcaccacg
tacgcccggcgcacgccgtaccgggtggagaccccgttccagatcaccctggccggccgg
gtgatccggggccgtatcgacgccgtctaccgcacgggggaccgttacgagatcgtcgac
tggaagaccacccgccaccgcaccgccgaccccctccagctcgccgtctaccgcctcgcc
tgggccgagctgcacgacctgccgctctccgccgtcaccgccaccttcctttacgtacgc
agcggggagaccgtccacccgcaggggctgccgggccgggccgagctggagcgcatcctg
ctggacgagccggtccccggggacggatag
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