Kazachstania africana: KAFR_0A00230
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Entry
KAFR_0A00230 CDS
T02487
Symbol
KAFR0A00230
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0A00230 (KAFR0A00230)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0A00230 (KAFR0A00230)
Spliceosome [BR:
kaf03041
]
Complex A
U1 snRNP components
U1 related factors
KAFR_0A00230 (KAFR0A00230)
Complex B
KAFR_0A00230 (KAFR0A00230)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
WW_2
ATP-grasp_IQCH
Motif
Other DBs
NCBI-GeneID:
13886465
NCBI-ProteinID:
XP_003954596
UniProt:
H2AM61
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All DBs
Position
1:46128..47798
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AA seq
556 aa
AA seq
DB search
MGDWKAAKDPKGRIYYYNTVTKKSTWEKPKNFAEPDQPSANDWKTGKTKDGKTYYYNVKT
RESRWTLPPEMKQEEKEEARPNKDSEKIVENLTSSNDKYKNDSKILNVASLPKEQAEPIF
MQMLKDNQVDSTWSFNRIISELSTTDARYWCVDDDPVWKQQVFEKYLSNRTEDQLLKEHS
ETNKFKQAFDKLLASNVQSGKLTEYTTWSSFKKIILDEPIYKHSVIDEGIKRKAFENFTN
NLRNQRQAERDNLKKQALEEFRIYLKSILFNGGSELKMISWHNLLNNYLFEKNKRFMANP
NFKILTHEDTLIEYLKLLSDFENDKLKIKLSELNEKNYTTDRIARDKYKKLLSGLSIKAN
TKWSEVYDQIKNDPIFFNMLGRNGSNAVDLFLDIVEEQKIILSAKRSIAQQILITNNFEW
SIDNESDDANKIRQILLNNVEKNEYEKEDIELLIIELVKVRNAKKQEQVALARQNLEQKK
YYLTQSLQRYYRGLNRKLIEDWEEAKEQLKDVISEYNELEEDVLKDTYAKFISNFDKQGT
VQSKKRPLAPTVELDY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattggaaggcggctaaggaccccaagggtagaatatattactataataccgtt
acaaaaaagtcgacatgggagaagcccaagaattttgctgaaccagatcagccaagtgct
aatgactggaagacgggtaagactaaagatgggaagacatactattataacgttaagacc
agggaatctaggtggactttaccccctgaaatgaaacaggaggaaaaggaggaagcaaga
cccaacaaagattcagaaaaaatcgtggaaaatttgacatcatcgaatgataaatataaa
aatgattccaagatattgaatgtagcctctttacctaaagagcaagcggaaccgattttc
atgcagatgctaaaggataaccaggtagattccacatggtcttttaatcgaatcatctct
gaattgagcactaccgatgcgaggtattggtgtgttgacgacgatccggtgtggaaacaa
caagtatttgagaaatatttaagtaatagaacagaggaccagttgctcaaagaacattcg
gaaacaaataaattcaaacaggcttttgataagttattagcttccaatgtacaaagcggt
aaactgaccgagtatacgacatggagttcgttcaagaaaattatcctagatgaaccaata
tacaagcattctgttatcgatgaagggatcaaacgcaaggcgtttgaaaacttcacaaat
aatctaaggaatcagaggcaggcagagcgtgataatctgaaaaaacaagctcttgaagaa
tttagaatttacttaaagagtattctattcaatggtggtagtgaactgaaaatgatatct
tggcataatcttttaaataattatttgtttgaaaaaaataagagatttatggcaaatcca
aattttaaaattttaacacatgaggatactctcattgaatatttgaagcttttaagtgat
tttgaaaacgacaaattgaagataaaattatcagagttgaatgaaaaaaattatacaacc
gatagaatagctcgtgacaaatataaaaagttactctcaggattatcaattaaagcaaat
accaaatggtcagaagtttatgatcaaatcaaaaacgaccctatcttttttaatatgctt
ggtagaaatggctccaatgctgtagatttgtttttagatattgtggaagaacaaaaaatt
attctctctgcaaagagatctattgcacaacaaatcttgatcacaaacaattttgaatgg
tcaattgataatgaatcggatgatgcaaataagatacgacaaatcctacttaacaacgtg
gagaaaaatgagtatgaaaaggaagatatcgaattgttaattattgaactagtaaaagta
cgaaatgccaagaaacaagaacaagtagctcttgcgagacagaatttggaacagaaaaaa
tactatttaacccaatctttacaaagatattatagaggacttaacaggaaactgattgaa
gattgggaagaagccaaggagcaactaaaagatgtgatttctgagtataatgagctggag
gaagatgtcttgaaagatacttatgctaagtttatcagcaattttgataagcaaggaacc
gttcagtcgaagaaaagacctttagcaccaactgtagaacttgattattga
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