Kazachstania africana: KAFR_0A01450
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Entry
KAFR_0A01450 CDS
T02487
Symbol
KAFR0A01450
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kaf
Kazachstania africana
Pathway
kaf03420
Nucleotide excision repair
kaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0A01450 (KAFR0A01450)
03430 Mismatch repair
KAFR_0A01450 (KAFR0A01450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0A01450 (KAFR0A01450)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KAFR_0A01450 (KAFR0A01450)
DNA repair and recombination proteins [BR:
kaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KAFR_0A01450 (KAFR0A01450)
MMR (mismatch excision repair)
Other MMR factors
KAFR_0A01450 (KAFR0A01450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
DEAD
AAA_lid_13
Motif
Other DBs
NCBI-GeneID:
13882313
NCBI-ProteinID:
XP_003954718
UniProt:
H2AMI3
LinkDB
All DBs
Position
1:286034..289384
Genome browser
AA seq
1116 aa
AA seq
DB search
MAMPNTVLGQLLATLNKQQRIAVEFDPNNALQVIAGPGTGKTKVLTSRVVYLLLHHKIEP
KDIVVTTFTNKAAKEMMDRLAKMLSGTAIRVDEITIGTFHSICLRVLLKYGFKVGLNRGW
RIVEEKEVEAIIHDLIKTMPDQIRDYANSYKRSVNLCRPTRNKDEWAVHPQMVKKEISRL
KSNALLPEEYENDSNHDPALAHFYTKYQSELGKLNALDFDDLLMYTFRLLTKERCLPDIK
HVLVDEFQDTNSIQMDLMFLFAKGDHHVSRGITVVGDPDQSIYAFRNALAQNFQQMQQKT
PLHCSQVVLVENYRSSQKILDTSETLIQQQIKGRTHRAPLRAQFDVEFPPVYVNFPVGFL
QSASIAREILYLKALPNLFSYNDFSILVRQRRQIKNIETALIEHRIPYKIVKGRAFWELK
EISAMMHLIKCAYSDNEKFSILSSLLYPAKGLGQTSADKIKKIFEDNPSQTPFSLLQDIE
KGAINLTMTTKVRSVIKDFIQMINFSRSFDKAPLKSSLENIFDTLYERSGMKNEYLYFDG
GKKSDTNDSNREANYENPRHKNILLLKKYFLGIDEIEDFIHSQSDQKTFIEDIQQVDTNV
IRSYIRTFFNSLSLYATESTSSDNEIDRTSKRKNSRNGEACVTISTIHGAKGLEWPVVFI
PGCIEGIIPSIFSRDESSSETESDTEEEGTNTSDKNVPKSNKKSSSLEEPVDEERRMFFV
AQTRAKLLLYLSSIKEGENPTQGGPSRFLTPEVRKTLINEQNALKNEKNIELLYKSMNKK
VPSDLIKRFSLKKLVQDYAQFIENRRESMIWNGRVIRNSFTLDITRNTVAMDDPISDFTT
AAAHLQTEVNKKPVLERQFQTMSRKGSTLSSTSKLWPKKAYAPQANQRLSPSPPKVHAPT
TTYPLQESPTKKKSYAPSYPHKPYSTTGTEFKIKQNKTDNDNILEKPFPISASNDRASNP
KMLATSKGSTNEAIKKELFSQNQVISSPKRISRTKSVTRKLIVSPIMIEDKKRYEEVKKN
GSVHHTVAGDRTAAEILHDPDDLIIDNRPILTSAKTLMKAIKKADSKSNQSSQKSFSEHQ
LKTEEASSSQFDILSQLSRAKKKAKLNDGEIIVIDD
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccaaatacggtccttggacagcttctcgcaacattgaataaacagcaaaga
attgccgtcgagtttgatccgaataatgcattacaagttattgcaggtcctggtaccggg
aaaaccaaagttttgacatcaagagtagtgtatctactgctgcatcataaaattgaacct
aaagatattgtcgtcacgacttttaccaataaagctgcgaaggaaatgatggataggctc
gccaagatgctaagcggcacggctattagagtagatgagattacgatagggacattccat
agcatatgtctaagagtcctattgaaatatggatttaaagttgggttaaatcgtggatgg
agaatagtcgaggagaaggaagtcgaagcaattattcatgatttgatcaagactatgcca
gatcaaattagagattatgcaaactcttataagaggtcggtaaatctatgtagacctact
agaaataaagacgaatgggccgtccatccacaaatggtgaaaaaggaaatatccagatta
aagtcaaatgcactcttaccagaggaatatgaaaatgattctaatcatgatccggctttg
gcccatttttacacgaaataccaatcagagttggggaaattgaatgctctagattttgat
gatttactcatgtacacatttagattgctaacaaaagaaagatgtcttccagacatcaaa
catgtccttgttgatgaatttcaagatactaacagcatacaaatggatttgatgtttttg
tttgccaaaggtgatcatcacgtttcaagaggtatcactgtggtgggcgatccagatcaa
agtatttatgcgtttagaaacgctctagcgcagaatttccaacagatgcaacaaaaaact
ccactacattgctcccaagttgtgttggtcgagaattatcgctcttctcaaaaaatttta
gatacaagtgaaactcttattcaacaacaaataaaaggacgtacgcacagagcacctctt
cgtgctcaattcgatgtggaattcccaccagtatatgttaattttccagtaggatttcta
caaagcgcttctattgcaagagaaattttatacctcaaagccttaccaaatctcttctct
tataacgatttttccatcctcgttagacaaagaaggcaaattaaaaacatcgaaactgcc
ttgattgaacacaggataccttataagattgtaaagggaagagcattttgggaattaaag
gaaatatcagcaatgatgcatctcataaaatgtgcatattcagataatgaaaagttttca
atactttcttcgttgctctaccctgcaaaaggcctgggacaaacatctgctgataagata
aaaaaaatattcgaagataatccctcacagacaccatttagtcttttacaagatattgag
aaaggtgctatcaatttaaccatgactacaaaagtaagatcagtaattaaggatttcata
cagatgataaatttctctagatcgttcgataaggcaccgttgaagtcgtctcttgaaaac
atatttgatacactatatgaacgatctggtatgaagaatgagtacctatattttgatggt
ggaaagaaatctgatacgaatgactctaatagagaagcgaactatgaaaatccaaggcat
aaaaacatcttattgttaaagaaatactttttgggaattgatgagattgaagacttcata
cactcccaatcagaccaaaaaacattcatcgaggatatacagcaagtggatacgaacgta
atacggagttatatacgtacttttttcaattcattgtccctgtatgcaacagagtctact
tcttcagacaatgagattgaccgtacttcgaaacgaaaaaatagtagaaacggtgaagca
tgtgtgacaatatctacaattcacggtgcaaaagggttggaatggccagtggtgttcatt
ccaggatgtatagaaggtataataccaagtatattctccagagacgaatctagctcagaa
acggaatccgatactgaagaagaaggcaccaatacaagtgacaaaaacgtgccaaaaagc
aacaagaaatccagtagtctggaggaacctgtagatgaagaacgtagaatgttttttgta
gctcagacacgtgcaaaattattattgtatctttcatcgataaaggagggagaaaacccc
acacaaggtggcccaagccgctttctaactccagaggtacgcaagacattaataaatgaa
caaaatgccttgaaaaacgaaaagaatattgaattactttacaaatcgatgaacaaaaaa
gtgccttcagacttaataaaacggttttctttgaaaaaattagttcaagactatgctcaa
tttattgaaaatagaagagaatcaatgatatggaacggaagggtcataagaaattcgttt
acgctggatattactagaaataccgtcgcaatggacgatcctatatcggactttacgacg
gctgctgcacacttacaaactgaagtaaataaaaaaccggtactggaaagacaattccag
acaatgtcaagaaaaggtagtacactttcatcaacatcaaagctatggccaaaaaaggca
tatgctccgcaggcgaaccagaggttaagtcccagcccgccgaaagtacatgctccaact
actacctatccgttacaagagtctcccactaagaagaaatcatacgcaccctcataccca
cataagccatattcaactactggcactgagtttaaaattaaacaaaacaaaactgacaat
gataatattctagaaaaacctttccctataagtgcaagtaatgatagagcatccaaccct
aaaatgttggctacctctaagggttctaccaatgaagcaataaaaaaggagcttttcagt
caaaatcaagttatctcttcaccaaagcgcataagtagaactaaaagcgtaaccaggaaa
ctgattgtgagcccaatcatgatagaggataaaaagagatatgaagaggtcaagaagaat
ggtagtgtacatcataccgtagctggggataggactgcagctgaaatattgcatgatcct
gacgatttaataattgataatagaccaattcttacgagtgccaaaactttgatgaaagcc
atcaagaaggcggattcaaaatctaatcagtccagccaaaaatctttcagcgaacaccag
cttaaaactgaagaagcatcctcaagtcaatttgacattttgtcacagttatccagggcc
aaaaagaaagctaagctgaatgatggtgagattattgttattgacgactaa
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