Kazachstania africana: KAFR_0A02370
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Entry
KAFR_0A02370 CDS
T02487
Symbol
KAFR0A02370
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
kaf
Kazachstania africana
Pathway
kaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KAFR_0A02370 (KAFR0A02370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0A02370 (KAFR0A02370)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KAFR_0A02370 (KAFR0A02370)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
13886453
NCBI-ProteinID:
XP_003954810
UniProt:
H2AMS5
LinkDB
All DBs
Position
1:489885..493505
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AA seq
1206 aa
AA seq
DB search
MAPSTPKTSRILKAKDGNTSSQKKMKQSSLLSFFSKQGTTAATPTKKAVSKIKGEKASSQ
PIQSQSPSVLSNTTAVSDSKNTSDTSFVSNDKNPVPDINTLNARKNSIHGNTDSSIGDIS
TSTVGNTSKRNKRNVSYAEDSDDDDELLNDLSFRKSKRAKRLQDDEDDEDEYIPNKDEKN
EADDDFINDDLDSDDDLMQFAATSERKPKLKTFTPPPAKKKYSPPKPQIKSKQNKFTKQN
EERYQWLVNETDAQGRPPTDPEYDPRTLHIPSSAWNKFTPFERQYWEIKSKMWDCVVFFK
KGKFFELYEKDALLGNSLFDLKLAGNGRANMQLAGIPEMSFEYWASQFIQHGYKVAKVDQ
RESMLAKEMREGSKGIVKRELECVLTSGTLTDGDMLHSDLATYCLAVREESGDFYNSFDD
STVNHPDKIFGISFIDTATGELQMLEFEDDNECSKLDTIMSQIRPKEIIIEKNNLSNLAN
KIVKFNSAANAIFNNVKPDTEFYNFDRTYDELISDNAKYFEDYSKWPKILKEYYEAKRRA
GFSAFGGLLYYLKWLKLDGSLISMGNIKEYNPIKSQNSLILDGVTLQNLEIFGNSCDGTE
KGTLFKLLNRAITPMGKRMMRTWLMHPLLQKNDIEKRLDSVDILMSDAELRDKLEVAFSK
LPDLERMLARIHSSTIKVKDFVKVIQGFEDICDLLKTISKTELEGALKQYISQVPSSLYD
DVENWTNVFDRYKASEEGIIIPHRGIEADFDKSLDDIKELENELDIILNEYRKKFKCSSI
NYKDSGKEIYTIEVPTMIVKSIPSNWIQMGANKSTKRYYSDEVKILARAMAEARESHKIL
EEDLKNRLCKKFDKGFNTSWMPTIHAIASVDCLIALTRTSECLGSPSCRPEFVDELDAKT
GDKLNGFLKFKSLRHPFFNMGSTTVKEFIPNDIELGKDVAQFGLLTGANAAGKSTVLRMT
CVAVIMAQMGCYLPCESAILTPVDRIMTRLGANDNIMQGKSTFYVELAETKKILDMATNR
SLLVLDELGRGGSSSDGFAIAESVLHHVATHVQSLGFFATHYGTLGSSFKEHPQVRPLRM
SIIVDEETRNVTFLYKLEDGESEGSFGMHVASMCGIPKSIVDNAQVAADNLEHTSRLVKE
RELATSGIDGEFNSIPLGLQSDIVRLVYGDGLTNGKKGCGEGVLVYDSNVRRNVLKNIFQ
IIEGLQ
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcaactccaaaaacttcaagaatcttgaaggctaaagacggcaacacttca
tcacagaagaagatgaaacagtcaagcttattgtccttcttttccaaacagggtacaacc
gctgctactccaaccaagaaagcagtatcaaaaatcaaaggtgaaaaagcatcctcccaa
ccgattcagtctcaatcacctagtgtactttcaaatactactgcagtatcagatagtaaa
aatacttctgacacatcttttgttagtaacgacaaaaatcctgttcctgacattaatact
ttaaatgcacgtaaaaactccatccatggaaacacagactccagtataggcgatatttct
acatccactgtcggcaatacctcaaaacgaaataagagaaatgtcagttatgctgaagac
agtgatgatgacgatgaactgctaaacgatctgtcttttcgtaaaagcaaaagagctaaa
agattgcaagatgacgaggatgatgaagacgaatatattccaaataaggacgagaaaaat
gaggcggacgatgatttcattaacgatgatttagacagtgatgatgacttgatgcaattt
gcagcaacaagcgaaagaaaaccaaaattaaaaacatttacacccccacctgcaaagaaa
aaatactcaccgccaaagcctcaaataaaatcaaaacaaaataaatttacaaaacaaaat
gaggagaggtatcaatggttagttaatgaaacggatgcgcaaggccgtccaccaactgat
ccagaatatgacccaagaactttgcacattccctcttcagcatggaacaagttcacgcca
tttgaaagacaatattgggaaataaagtctaaaatgtgggattgtgttgtcttctttaag
aagggtaagttctttgaattatatgagaaggatgcgttattgggtaactccttatttgat
cttaaattagcaggtaatggtagagctaatatgcagctagcgggtatcccagaaatgtcc
tttgaatattgggcttctcagtttattcaacatggttacaaagtcgcgaaagttgaccaa
agggaatctatgctagccaaagaaatgagagaaggatctaaaggtattgttaaaagagaa
ctggaatgcgtactcacatccggtactttaaccgatggagatatgctgcactccgatctg
gcgacttattgtcttgcagttagagaagaatctggcgatttttataattcttttgatgac
tctactgttaatcatcctgataagatattcggtatttcatttattgatactgctaccggt
gaattacaaatgttggaatttgaagatgataatgaatgctcaaaattagataccattatg
tcacagataagacccaaagagattatcatcgaaaagaataacttgagcaacttagcaaat
aaaattgtaaagtttaattcagctgcaaatgcaattttcaacaatgtaaagccagatact
gaattttataactttgatagaacttatgatgagcttatttcagataacgcaaaatatttc
gaggattattcaaaatggcccaaaattttaaaagaatattacgaagcaaaaaggcgtgct
ggatttagtgcctttggtggtttactctactatttaaagtggctaaaattggatggaagc
ctgatctctatggggaatattaaggaatataacccaataaaatctcaaaactcattaatc
ttagacggtgtaactttgcaaaaccttgaaatctttgggaactcttgtgatggtacagaa
aagggcaccctatttaaattattgaatagagccattacaccaatgggtaagagaatgatg
aggacgtggttaatgcatcccttgctacaaaagaatgacattgaaaaaagattggatagt
gttgatattttgatgtctgatgcagaattaagagataagttagaagttgccttttccaaa
ctgcctgacctggaaagaatgttggcaagaatacattccagtacaatcaaggtaaaagat
tttgtcaaagttattcaaggctttgaagatatatgtgatttactcaagacaatatccaaa
actgaattagagggagctttaaagcaatacatcagtcaggttccatcttctttatatgat
gatgtggaaaattggacaaatgtcttcgatagatataaagcatcagaagaaggcattata
ataccacatagggggattgaagcagattttgataagtcattggatgatataaaggaatta
gaaaatgaattagatatcatattgaatgaatacagaaaaaaattcaaatgctccagtatc
aattataaagattctggtaaagaaatatatacaatcgaagttcctactatgatagtgaaa
tcaattccatctaattggattcaaatgggtgcaaacaaatctacaaagagatactattca
gatgaagttaagattttagcaagagcaatggcagaggctcgcgagtcgcataagatcttg
gaagaggatcttaaaaacaggttatgtaagaaatttgacaaaggctttaacactagttgg
atgccaaccattcatgcaattgcaagtgtagactgtttaatagccttaaccaggacttca
gaatgtttaggctcaccatcatgcagaccagaatttgtggacgaacttgatgcaaagacg
ggagataaattgaatggttttttgaaatttaaatcattaagacatccttttttcaatatg
ggttccaccactgtaaaagaatttattccaaatgatatagaattaggtaaggacgttgct
caatttgggttactaacaggtgctaatgcagcaggtaaatctacagttctaagaatgaca
tgtgttgcggtaataatggcacaaatgggctgctatcttccttgtgaaagtgcaatttta
acaccagttgacaggattatgacacgtctaggtgctaatgataatattatgcagggaaaa
tctacattctatgttgaactagctgagacaaagaagattttagatatggctacaaataga
tcattattggtattggacgaattaggtagaggtggttcatctagtgatgggtttgccatt
gctgagagtgtactacatcatgtagccacacatgtacaaagcttaggctttttcgctaca
cattatggtactttaggatctagttttaaagagcatccacaagtaagacctttgagaatg
agtattattgttgatgaagagacaagaaacgttacatttttgtataagttagaggatgga
gagagtgaagggtcatttggtatgcatgttgcctcaatgtgtgggattcctaaatctatt
gttgacaatgcgcaagttgctgctgacaatttagaacatacttcaaggttagtgaaggag
agagagttggcgacgagtggcattgatggtgaattcaatagtataccacttgggttacag
agtgacattgttagattagtttatggtgatgggttgactaatggtaagaaaggttgtggt
gaaggcgtacttgtttatgattcaaatgtcagacgtaatgtattgaaaaatattttccaa
attattgaaggattacagtag
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