KEGG   Kazachstania africana: KAFR_0B00250
Entry
KAFR_0B00250      CDS       T02487                                 
Symbol
KAFR0B00250
Name
(RefSeq) hypothetical protein
  KO
K12600  superkiller protein 3
Organism
kaf  Kazachstania africana
Pathway
kaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KAFR_0B00250 (KAFR0B00250)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kaf03019]
    KAFR_0B00250 (KAFR0B00250)
Messenger RNA biogenesis [BR:kaf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     KAFR_0B00250 (KAFR0B00250)
SSDB
Motif
Pfam: TPR_19 TPR_22 TPR_11 TPR_CcmH_CycH TPR_2 TPR_14 TPR_8 TPR_17 TPR_1 TPR_16 TPR_12 TPR_9 Phage_hub_GP28 ANAPC3 HrpB1_HrpK Alkyl_sulf_dimr TPR_Slam ARM_TT21_4th
Other DBs
NCBI-GeneID: 13882493
NCBI-ProteinID: XP_003955460
UniProt: H2APM5
LinkDB
Position
2:complement(58608..62870)
AA seq 1420 aa
MADVKQLLKEAKQELARADYEEAISISKEVLKLDKNNYFAYVFLGKSYASLTENDINHNL
TNAVNNYKSATQLVPENLLAWKGLFLLFQNHETRKHILPDIVSFDDFFLLCSTYMEVLLE
LQESQVDLINLIKNMKLHFTGNDDFSESYYKSFRTGTLLYELMGRHLFKDPGQPLQELIK
ILSAKETLQVSKILSQERLKLSTNDPNYQIKVNSLAWKIYKDSILDDLYNQLVNLIDDDA
ERKALEGMWLEYRIKVLKSMPTDIKLQYFDKIRTMVDEMVLIDHDSLIAWKYYFDWSDFS
DLDSMDPMIVIKFFQRFPNEPLAILLYAWINSNFSSYNVKALDIKLDEADSRNTDFEEDE
DEEELKELMQNDRDDEDQSKDKGWLSEEDILTTLIENIGQTKNSTLAYRIISRYYILNKE
YEAASKYIKAGISLISYNIRDLGTNLINSKKELTIDLATCYTYVESPKNHKPALSLFDKI
LSEDPTNINAKIGKGIIAIEREDWNGAYTLITNIIEQEPSTSSNLEILSQLAWCKGHIGE
LDESVELFTTIVNKIEGTDLRTLEFKSKTLWRQAKVYISKYYEDKDDINIKIAFKLLVQV
IKYCSDTYAEAYSLLGDIYAKFYNDRGRAFKCYYKAFELDSGDIAAAEYICTIYTDCGNW
ATASQIAERLIKSENAKTELRKANWPYRVMGISFLEDQNETDSIEWFQSALRVDPNDIES
WVGLGQAYFACGRVEASIKVFEKAVELSPDHNYAKYFNSVALAQMDEFERAIDILRHVLK
DEPEKEVFKMELATQIVDYSFDLYNQGYLMKAIAIISEAIDLIKELVIDLDCVIQNVWIT
LSKVLYLYLLVESKIDTLPVESLVAIFSAFVLPEETEEINNIDGVTLDKLLSSESTDNIS
IACDFLILASKYAIASHADNFQTLPGTLRSSIWYNLGISELMAYCTIKELRYKDAAIMSF
KKSIKYQSNSPEAWIGFGIATMELNYHVAQHCFIKAMVLSPKDVEIWFNLALLALQNNDT
VLAGEIMSRAQSMAPQNSSPWLGMALLYEKEGKSTESANMFGHSYILANGRSKIVQLLYA
SSVLKNRIGGGNEERDLTATEELNTIAFGLEQYFKKNPNDPFALQCALLVLERLHNFKVA
EKLANRLTENLEKRFEKTQNDEELFNFAIVKSQLARIQLGSGDYENAVENANLSQGLLTD
YQENGLHSKKVLKGILSNYICLGLSFFYLGNFDETLVNFQQLLNLSKDSKSLIMLISKVL
YEVGDEAKEIAMQELTDYALQYGSDLFITLTIVAMTILENDGDSMRHVLDELKSIGPSHI
IADKHKEVQQLIEEIQKRLKITSDKTLTQRAAFLFPNNSNSWNHLDEKIKQKLSTDGQNK
ITAEQLSNSYCKLKDVRSIQKSLFLTPWNKNAISALNGCF
NT seq 4263 nt   +upstreamnt  +downstreamnt
atggccgacgtcaagcagttgctaaaggaggctaaacaagaattggcaagagccgactat
gaagaagccatttctatttcgaaagaagtcttgaagctggataagaataactattttgca
tatgtgtttctgggaaaatcctatgcttctttgacagaaaatgatattaatcataaccta
acgaatgcagtgaacaattataagtcagcgacacagttggttccagagaaccttctggca
tggaaaggcctgtttcttctgtttcaaaatcatgagactaggaaacatattcttccggat
atcgtgtcatttgatgactttttcctactgtgtagtacgtacatggaggtgttgcttgag
ctccaggagtctcaggtcgatctcataaacttgataaagaacatgaagctacatttcaca
ggcaatgatgacttttcagaatcttattataaatctttccgaactggtacattactgtat
gaactgatgggtaggcatttattcaaagacccaggtcaacccttacaagagttaatcaag
attctaagtgcaaaagagacattgcaagtatctaaaattttaagtcaagaaagattgaag
ctgagtaccaatgatccaaattatcaaatcaaagtaaattcattagcatggaaaatctac
aaggactctatattagatgatctttataatcagttagtgaacttgatcgatgatgatgcc
gaaagaaaagccctagagggaatgtggcttgaatatagaataaaagtattgaaatcaatg
ccaaccgatatcaaattgcagtattttgacaaaataaggacaatggttgatgaaatggtt
ctgattgatcacgactctttgattgcatggaaatattatttcgattggtctgatttcagt
gatctagactcgatggatcctatgattgtaataaaatttttccagcgatttcctaatgaa
cctttggccattttactgtatgcctggattaactctaatttttcaagttataatgtaaaa
gcactagatattaaacttgatgaagcagattcaaggaatactgattttgaagaagatgaa
gatgaagaagagcttaaggaactgatgcaaaatgatagggatgatgaagaccaatcaaaa
gataagggttggttatctgaggaagatatattgacgactttgatagaaaatatcggccag
actaaaaacagtaccttagcttatcgtatcatatctcgatactatattctaaataaagaa
tatgaggctgcttccaaatatatcaaagctggtatatcacttatctcatataatattaga
gatcttggtacaaatttgataaacagtaagaaagagctgacgatcgatttagccacgtgt
tacacttatgtcgaatctccaaagaatcataagcctgctttatctttgtttgataaaatc
ttgtccgaggatccaacaaatattaatgcaaaaataggtaaaggtattattgccattgaa
agggaggattggaacggcgcttatacgttaataactaatatcattgaacaagaaccttca
acttcatcaaatttagaaattctttcacagttggcatggtgtaaagggcacattggtgag
ttagatgagtcagtcgagttatttacaacaattgtgaacaaaattgaagggactgattta
cgtacattggaatttaaatcgaagaccctgtggagacaagccaaagtttatatttcgaaa
tactacgaggataaagatgatatcaatataaaaattgcgttcaagttactggttcaagtt
attaaatattgttcggacacctatgcagaagcttactcattattgggtgatatctatgca
aagttttacaatgacagaggaagagcttttaagtgttactataaggcctttgagctagat
tctggtgatatagctgcagcagaatatatctgtaccatctatactgactgtggtaactgg
gcaacagcttcccagattgcggaaagattgatcaaatcggaaaatgccaaaaccgaattg
cgcaaggctaactggccatacagagttatggggatttcatttttagaggaccagaatgaa
actgattcgatcgaatggttccagtctgcattacgtgttgatccaaatgatatagaatcg
tgggttggtttaggtcaggcctattttgcatgtgggcgtgttgaagcctctatcaaagtt
tttgaaaaagctgtcgagctgtctcctgaccataactacgctaaatatttcaattccgta
gcgcttgctcaaatggatgagttcgaaagagcaatcgatatactaagacatgtcttgaag
gacgagccggaaaaggaggtatttaagatggaattggcgactcaaatagttgattattct
tttgatttatacaatcagggttatctcatgaaagcaatagcaatcattagcgaagccatc
gatctgatcaaggaattagtcatagatttggactgtgtcattcagaatgtatggattaca
ctgtccaaagtgctttatctttatctattggtagaatcaaaaatcgatacactaccagtc
gaatcattggtagccattttttctgcatttgttttacctgaggaaactgaggaaataaat
aatattgatggtgtcacccttgataagttgctgtcttccgaaagtacggacaatatatct
attgcatgcgactttctgatattggcctccaaatatgcaattgcatcccatgcagacaac
tttcagactttaccaggtacgcttagatcatctatatggtataatcttggtatttcggaa
ctgatggcttactgcactatcaaggaattacgctataaagatgctgcaattatgtctttt
aaaaaatctatcaaatatcaatctaatagtccagaagcttggattgggttcggtatagcc
acaatggaactgaattatcatgttgcccaacattgttttattaaagcaatggttttatca
ccaaaggatgtcgaaatctggtttaatctagcattactcgctctgcaaaataacgatact
gtattggctggtgaaataatgtcgagagcccaaagcatggccccacagaactcctcacca
tggctgggtatggcattgttatatgaaaaggagggtaaatctactgaaagtgcaaacatg
tttgggcattcgtatattttggccaatggtagatctaagattgtacagctcttatatgca
agtagcgttttaaaaaacagaatagggggtggtaatgaagaaagagacctcactgctact
gaagaactgaatactattgcttttggtctggagcagtatttcaaaaaaaatccgaatgat
ccattcgcattacaatgtgctttgttggtgttggaaagacttcacaacttcaaggttgct
gaaaagcttgctaacagattgactgagaaccttgagaagagattcgaaaaaactcaaaat
gatgaggaattgtttaattttgccattgtcaaatctcaattggcaagaattcaattaggt
tccggtgattacgaaaatgccgtagaaaatgcaaatttatcgcagggtttattgacagat
taccaggaaaatggtttgcatagcaagaaagtgctgaagggaattttatccaactatatt
tgtctgggattatcgtttttctatcttggcaacttcgacgaaactctagtaaactttcaa
caattgttgaacctctcaaaagactccaaaagtctgataatgcttatatcgaaagttctt
tatgaagtaggcgatgaagctaaagaaatagcaatgcaggaattaaccgattatgctcta
caatacggctctgatcttttcatcaccttgacaattgttgctatgaccattttagaaaac
gatggtgatagcatgaggcacgtgttggatgaattgaaatcaattgggccttcacatata
attgctgataaacataaagaagtacaacaattgattgaagagatacagaagagactaaag
attacttcagacaaaactttaactcagagagcagcattcttgtttcctaataattccaat
tcctggaaccatctagacgaaaaaattaaacaaaaactttccacagacggtcaaaacaaa
attactgctgagcagttgagtaattcgtactgtaagttaaaggacgttaggagtatccag
aagagtttattcctgacaccttggaataaaaatgctatatcagctttaaatggttgtttc
tga

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