Kazachstania africana: KAFR_0B00250
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Entry
KAFR_0B00250 CDS
T02487
Symbol
KAFR0B00250
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
kaf
Kazachstania africana
Pathway
kaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAFR_0B00250 (KAFR0B00250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0B00250 (KAFR0B00250)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
KAFR_0B00250 (KAFR0B00250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_11
TPR_CcmH_CycH
TPR_2
TPR_14
TPR_8
TPR_17
TPR_1
TPR_16
TPR_12
TPR_9
Phage_hub_GP28
ANAPC3
HrpB1_HrpK
Alkyl_sulf_dimr
TPR_Slam
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
13882493
NCBI-ProteinID:
XP_003955460
UniProt:
H2APM5
LinkDB
All DBs
Position
2:complement(58608..62870)
Genome browser
AA seq
1420 aa
AA seq
DB search
MADVKQLLKEAKQELARADYEEAISISKEVLKLDKNNYFAYVFLGKSYASLTENDINHNL
TNAVNNYKSATQLVPENLLAWKGLFLLFQNHETRKHILPDIVSFDDFFLLCSTYMEVLLE
LQESQVDLINLIKNMKLHFTGNDDFSESYYKSFRTGTLLYELMGRHLFKDPGQPLQELIK
ILSAKETLQVSKILSQERLKLSTNDPNYQIKVNSLAWKIYKDSILDDLYNQLVNLIDDDA
ERKALEGMWLEYRIKVLKSMPTDIKLQYFDKIRTMVDEMVLIDHDSLIAWKYYFDWSDFS
DLDSMDPMIVIKFFQRFPNEPLAILLYAWINSNFSSYNVKALDIKLDEADSRNTDFEEDE
DEEELKELMQNDRDDEDQSKDKGWLSEEDILTTLIENIGQTKNSTLAYRIISRYYILNKE
YEAASKYIKAGISLISYNIRDLGTNLINSKKELTIDLATCYTYVESPKNHKPALSLFDKI
LSEDPTNINAKIGKGIIAIEREDWNGAYTLITNIIEQEPSTSSNLEILSQLAWCKGHIGE
LDESVELFTTIVNKIEGTDLRTLEFKSKTLWRQAKVYISKYYEDKDDINIKIAFKLLVQV
IKYCSDTYAEAYSLLGDIYAKFYNDRGRAFKCYYKAFELDSGDIAAAEYICTIYTDCGNW
ATASQIAERLIKSENAKTELRKANWPYRVMGISFLEDQNETDSIEWFQSALRVDPNDIES
WVGLGQAYFACGRVEASIKVFEKAVELSPDHNYAKYFNSVALAQMDEFERAIDILRHVLK
DEPEKEVFKMELATQIVDYSFDLYNQGYLMKAIAIISEAIDLIKELVIDLDCVIQNVWIT
LSKVLYLYLLVESKIDTLPVESLVAIFSAFVLPEETEEINNIDGVTLDKLLSSESTDNIS
IACDFLILASKYAIASHADNFQTLPGTLRSSIWYNLGISELMAYCTIKELRYKDAAIMSF
KKSIKYQSNSPEAWIGFGIATMELNYHVAQHCFIKAMVLSPKDVEIWFNLALLALQNNDT
VLAGEIMSRAQSMAPQNSSPWLGMALLYEKEGKSTESANMFGHSYILANGRSKIVQLLYA
SSVLKNRIGGGNEERDLTATEELNTIAFGLEQYFKKNPNDPFALQCALLVLERLHNFKVA
EKLANRLTENLEKRFEKTQNDEELFNFAIVKSQLARIQLGSGDYENAVENANLSQGLLTD
YQENGLHSKKVLKGILSNYICLGLSFFYLGNFDETLVNFQQLLNLSKDSKSLIMLISKVL
YEVGDEAKEIAMQELTDYALQYGSDLFITLTIVAMTILENDGDSMRHVLDELKSIGPSHI
IADKHKEVQQLIEEIQKRLKITSDKTLTQRAAFLFPNNSNSWNHLDEKIKQKLSTDGQNK
ITAEQLSNSYCKLKDVRSIQKSLFLTPWNKNAISALNGCF
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcaagcagttgctaaaggaggctaaacaagaattggcaagagccgactat
gaagaagccatttctatttcgaaagaagtcttgaagctggataagaataactattttgca
tatgtgtttctgggaaaatcctatgcttctttgacagaaaatgatattaatcataaccta
acgaatgcagtgaacaattataagtcagcgacacagttggttccagagaaccttctggca
tggaaaggcctgtttcttctgtttcaaaatcatgagactaggaaacatattcttccggat
atcgtgtcatttgatgactttttcctactgtgtagtacgtacatggaggtgttgcttgag
ctccaggagtctcaggtcgatctcataaacttgataaagaacatgaagctacatttcaca
ggcaatgatgacttttcagaatcttattataaatctttccgaactggtacattactgtat
gaactgatgggtaggcatttattcaaagacccaggtcaacccttacaagagttaatcaag
attctaagtgcaaaagagacattgcaagtatctaaaattttaagtcaagaaagattgaag
ctgagtaccaatgatccaaattatcaaatcaaagtaaattcattagcatggaaaatctac
aaggactctatattagatgatctttataatcagttagtgaacttgatcgatgatgatgcc
gaaagaaaagccctagagggaatgtggcttgaatatagaataaaagtattgaaatcaatg
ccaaccgatatcaaattgcagtattttgacaaaataaggacaatggttgatgaaatggtt
ctgattgatcacgactctttgattgcatggaaatattatttcgattggtctgatttcagt
gatctagactcgatggatcctatgattgtaataaaatttttccagcgatttcctaatgaa
cctttggccattttactgtatgcctggattaactctaatttttcaagttataatgtaaaa
gcactagatattaaacttgatgaagcagattcaaggaatactgattttgaagaagatgaa
gatgaagaagagcttaaggaactgatgcaaaatgatagggatgatgaagaccaatcaaaa
gataagggttggttatctgaggaagatatattgacgactttgatagaaaatatcggccag
actaaaaacagtaccttagcttatcgtatcatatctcgatactatattctaaataaagaa
tatgaggctgcttccaaatatatcaaagctggtatatcacttatctcatataatattaga
gatcttggtacaaatttgataaacagtaagaaagagctgacgatcgatttagccacgtgt
tacacttatgtcgaatctccaaagaatcataagcctgctttatctttgtttgataaaatc
ttgtccgaggatccaacaaatattaatgcaaaaataggtaaaggtattattgccattgaa
agggaggattggaacggcgcttatacgttaataactaatatcattgaacaagaaccttca
acttcatcaaatttagaaattctttcacagttggcatggtgtaaagggcacattggtgag
ttagatgagtcagtcgagttatttacaacaattgtgaacaaaattgaagggactgattta
cgtacattggaatttaaatcgaagaccctgtggagacaagccaaagtttatatttcgaaa
tactacgaggataaagatgatatcaatataaaaattgcgttcaagttactggttcaagtt
attaaatattgttcggacacctatgcagaagcttactcattattgggtgatatctatgca
aagttttacaatgacagaggaagagcttttaagtgttactataaggcctttgagctagat
tctggtgatatagctgcagcagaatatatctgtaccatctatactgactgtggtaactgg
gcaacagcttcccagattgcggaaagattgatcaaatcggaaaatgccaaaaccgaattg
cgcaaggctaactggccatacagagttatggggatttcatttttagaggaccagaatgaa
actgattcgatcgaatggttccagtctgcattacgtgttgatccaaatgatatagaatcg
tgggttggtttaggtcaggcctattttgcatgtgggcgtgttgaagcctctatcaaagtt
tttgaaaaagctgtcgagctgtctcctgaccataactacgctaaatatttcaattccgta
gcgcttgctcaaatggatgagttcgaaagagcaatcgatatactaagacatgtcttgaag
gacgagccggaaaaggaggtatttaagatggaattggcgactcaaatagttgattattct
tttgatttatacaatcagggttatctcatgaaagcaatagcaatcattagcgaagccatc
gatctgatcaaggaattagtcatagatttggactgtgtcattcagaatgtatggattaca
ctgtccaaagtgctttatctttatctattggtagaatcaaaaatcgatacactaccagtc
gaatcattggtagccattttttctgcatttgttttacctgaggaaactgaggaaataaat
aatattgatggtgtcacccttgataagttgctgtcttccgaaagtacggacaatatatct
attgcatgcgactttctgatattggcctccaaatatgcaattgcatcccatgcagacaac
tttcagactttaccaggtacgcttagatcatctatatggtataatcttggtatttcggaa
ctgatggcttactgcactatcaaggaattacgctataaagatgctgcaattatgtctttt
aaaaaatctatcaaatatcaatctaatagtccagaagcttggattgggttcggtatagcc
acaatggaactgaattatcatgttgcccaacattgttttattaaagcaatggttttatca
ccaaaggatgtcgaaatctggtttaatctagcattactcgctctgcaaaataacgatact
gtattggctggtgaaataatgtcgagagcccaaagcatggccccacagaactcctcacca
tggctgggtatggcattgttatatgaaaaggagggtaaatctactgaaagtgcaaacatg
tttgggcattcgtatattttggccaatggtagatctaagattgtacagctcttatatgca
agtagcgttttaaaaaacagaatagggggtggtaatgaagaaagagacctcactgctact
gaagaactgaatactattgcttttggtctggagcagtatttcaaaaaaaatccgaatgat
ccattcgcattacaatgtgctttgttggtgttggaaagacttcacaacttcaaggttgct
gaaaagcttgctaacagattgactgagaaccttgagaagagattcgaaaaaactcaaaat
gatgaggaattgtttaattttgccattgtcaaatctcaattggcaagaattcaattaggt
tccggtgattacgaaaatgccgtagaaaatgcaaatttatcgcagggtttattgacagat
taccaggaaaatggtttgcatagcaagaaagtgctgaagggaattttatccaactatatt
tgtctgggattatcgtttttctatcttggcaacttcgacgaaactctagtaaactttcaa
caattgttgaacctctcaaaagactccaaaagtctgataatgcttatatcgaaagttctt
tatgaagtaggcgatgaagctaaagaaatagcaatgcaggaattaaccgattatgctcta
caatacggctctgatcttttcatcaccttgacaattgttgctatgaccattttagaaaac
gatggtgatagcatgaggcacgtgttggatgaattgaaatcaattgggccttcacatata
attgctgataaacataaagaagtacaacaattgattgaagagatacagaagagactaaag
attacttcagacaaaactttaactcagagagcagcattcttgtttcctaataattccaat
tcctggaaccatctagacgaaaaaattaaacaaaaactttccacagacggtcaaaacaaa
attactgctgagcagttgagtaattcgtactgtaagttaaaggacgttaggagtatccag
aagagtttattcctgacaccttggaataaaaatgctatatcagctttaaatggttgtttc
tga
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integrated database retrieval system