Kazachstania africana: KAFR_0B02570
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Entry
KAFR_0B02570 CDS
T02487
Symbol
KAFR0B02570
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
kaf
Kazachstania africana
Pathway
kaf03022
Basal transcription factors
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAFR_0B02570 (KAFR0B02570)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0B02570 (KAFR0B02570)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0B02570 (KAFR0B02570)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0B02570 (KAFR0B02570)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0B02570 (KAFR0B02570)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KAFR_0B02570 (KAFR0B02570)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KAFR_0B02570 (KAFR0B02570)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KAFR_0B02570 (KAFR0B02570)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KAFR_0B02570 (KAFR0B02570)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
13882935
NCBI-ProteinID:
XP_003955689
UniProt:
H2AQA4
LinkDB
All DBs
Position
2:511567..513906
Genome browser
AA seq
779 aa
AA seq
DB search
MKFFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLSVAYQ
MHYPEHRKIIYCSRTMSEIEKTLVELENLMDYRSRELGYVEEFRGLGLTSRKNLCLHPVV
SKERKGTVVDEKCRRLTNGVNKRKLQENPDATDAELCEYHENLYDMEVENYLPKGVFSFE
KLIKYAEEKTICPYFIVRRMISLCNIIVYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN
IDNVCIESLSLDLTNDVLRRATKGANALEGRIEEVRKADSKKLQDEYDKLVQGLHADDIL
TVAEEPFVETPVLSQDLLKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPKSF
LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFTLI
IEPYEIENAAVPNPIMRFSCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFETIL
QKSYSMTLDKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV
FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL
SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM
RHAAQCLGRVLRGKDDYGVMVLADRRFSRKKNQLPKWIAQGLSDADLNLSTDMAISNTKQ
FLRTMAQPTNPKDQEGVSVWSLDDLTKFQQSHQQKTNNGNQMANIDKENVDQEGDTVMG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttatagatgatttaccggttctctttccttatccaaagatttatcctgaa
cagtaccagtacatgtgtgatattaaaaaaactctggatgccggaggtaacagtatctta
gaaatgccttcagggacagggaagactgtctcattattatctctatcggttgcatatcag
atgcactatccagaacacaggaagatcatatattgttcccgtaccatgtcggaaattgag
aaaactttggtagaattggaaaatttgatggattatagatcccgtgaactaggctacgtc
gaggaattcagaggacttggattaacgtcaagaaaaaatttatgtctacatcccgtggtg
agtaaagaaaggaaaggtacagtggtggatgaaaaatgtcgtcgcttaaccaatggtgtc
aacaaacgaaagttacaggaaaatcctgatgctaccgatgctgaattatgtgaataccat
gaaaacttgtacgatatggaggtagagaattatttaccaaagggtgtcttttcatttgaa
aaattgatcaaatatgctgaagaaaaaactatctgtccatattttattgtacgtcgtatg
atctcattatgtaatatcatcgtctattcatatcattatctgctagatccaaaaattgct
gaaagagtgtcgaatgaagtctctaaagatagtattgtcattttcgatgaagctcacaat
atcgataatgtttgtatagagtcattgtcattagacttgacaaacgatgtgcttaggaga
gcaacgaagggtgccaatgcattagaaggtaggatagaagaagtacgtaaggctgattca
aaaaaattacaagacgaatatgataaactagttcaaggtttacatgctgatgatatcctg
actgttgctgaagaaccctttgttgaaactcctgtattatcgcaagatctgttgaaggag
gcaattcctggtaatataagaagggccgaacattttatctcgttcttaaagagacttata
gagtatctgaaaacgagaatgaaggtcttgcatgtgatctcagaaacgccaaaatctttt
cttcagcatttgaaacagttgacttttattgataggaaaccattgagattctgttcagaa
cgtctctctttactggttagaacattggaagtgaccgaggtggaagatttcacggctctg
aaagatattgcaacttttgcaacattaatttctacttatgaagatggtttcaccttaatt
atcgagccatatgaaattgaaaatgctgcggttcctaatcctataatgagattttcctgt
cttgatgcatcaattgcaataaaaccggtatttgaaaagttttcctccgtaattattacc
tcaggaactatatcacctttagatatgtatccaagaatgttaaatttcgaaacaatcctt
caaaaatcttactcaatgacactagataaaaaatcatttttacccatgattatcacaaaa
gggtcagatcaagtggccatttcttccagatttgaaatcagaaatgatccaagtattgtt
cgtaattacggttctatgctggtggaatttgcaaagattactccagacgggatggtggtc
tttttcccctcatatctgtatatggagagtattgtttcgatgtggcaaacaatgggtata
ttagacgaagtatggaagcacaaactgattttggtcgaaacaccggatgctcaagaaacg
tccctagctttggagacatatagaaaagcttgttccaatggtagaggtgccatactttta
tctgttgccagaggaaaagtttctgaaggtatcgattttgatcatcattacggtagaact
gtgctgatgatcggtatccctttccaatatacggaatcacgtatcctaaaagctcgttta
gagtttttaagagaaaactatcaaatcagagaaaatgatttcctgtcgttcgatgcaatg
agacatgctgcacaatgtttgggtagagtcttgagaggtaaagatgattatggggtaatg
gtgttggcagatcgtagattttcaaggaagaaaaatcaactaccaaaatggattgcacag
ggtctatcagacgcagatttgaatctctcgactgatatggctatttcaaatacaaaacag
tttttaagaacaatggcccaaccaacaaatccaaaggatcaggaaggtgtatctgtttgg
agtttagatgatttgactaagtttcaacaaagccatcaacaaaagacgaacaatggcaat
cagatggctaatattgacaaggaaaatgttgatcaagagggtgacactgtgatgggttaa
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