Kazachstania africana: KAFR_0B04560
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Entry
KAFR_0B04560 CDS
T02487
Symbol
KAFR0B04560
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0B04560 (KAFR0B04560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0B04560 (KAFR0B04560)
03009 Ribosome biogenesis [BR:
kaf03009
]
KAFR_0B04560 (KAFR0B04560)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAFR_0B04560 (KAFR0B04560)
Spliceosome [BR:
kaf03041
]
Complex A
U1 snRNP components
U1 related factors
KAFR_0B04560 (KAFR0B04560)
Complex B
KAFR_0B04560 (KAFR0B04560)
Ribosome biogenesis [BR:
kaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
KAFR_0B04560 (KAFR0B04560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
13883292
NCBI-ProteinID:
XP_003955888
UniProt:
H2AQV3
LinkDB
All DBs
Position
2:complement(join(947248..947615,948264..949527))
Genome browser
AA seq
543 aa
AA seq
DB search
MGYRDQQYNRSNYNSRGGDFRGGRDSDRNSYNRSENRNNNGYQGGRGFRSEPQELVAPNW
EEELPRLPSFEKNFYVEHEDVRNRSDADVAKFRQENEMTISGHDIPKPITNFEEAGFPDY
VLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSP
GDGPIVLVLSPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPKGQQIRDLVRGAEIVIAT
PGRLIDMMEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK
EVRQLAADYLNDPIQVQVGSLELSASHNITQLVEVLSDFEKRDRLSKHLEIASEDKDSKI
LVFASTKRTCDDITKYLRADGWPALAIHGDKDQKERDWVLNEFRCGRSPIMVATDVAARG
IDVKGINFVINYDMPGNIEDYVHRIGRTGRAGAKGTAISFFTEDNKSLGAKLISIMREAK
QTIPNELLKYDKRQNYGGHPRYGGGRGGRGGYGRGRGGYGGNFGGNRGYNRPRDNGWGRG
GNR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggttacagagatcaacaatacaatagatcaaactacaacagccgtggaggtgacttc
cgtggtggtagagattccgacagaaattcatacaatagaagtgaaaaccggaataacaac
ggctatcaaggcggtcgtggattcagaagtgaaccacaagaattagttgctccaaattgg
gaagaagaattgccaaggctcccatctttcgagaaaaatttctacgttgaacacgaggac
gttagaaatagatccgatgctgacgttgccaagttcagacaagaaaatgaaatgaccatt
tccggtcatgacattccaaagccaattactaattttgaagaagccggtttccctgactac
gtcttaaaggaagttaaagccgaaggttttgacaaaccaacctctattcaatgtcaaggt
tggccaatggctttatctggtagagatatggtcggtattgctgctactggttccggtaaa
acattgtcttactgtttaccaggtattgttcatatcaacgctcaaccacttttgtctcca
ggtgatggtccaattgtcctagtcctatcaccaacaagagaacttgctgttcaaattcaa
aaggaatgttccaaattcggtcattcttcaagaattagaaacacttgtgtctacggtggt
gttccaaagggtcaacaaatcagagatttagttcgtggtgctgaaattgtcattgctact
ccaggtagattgatcgatatgatggaaattggtaagactaacttaaagagagtcacttac
ttagtcttagatgaagctgatagaatgttggatatgggtttcgaaccacaaattagaaag
attgtcgaccaaattagaccagacagacaaactttaatgtggtctgccacatggcctaag
gaagtcagacaattagctgctgactacttaaatgatccaattcaagttcaagttggttcc
ttagaattatctgcttctcacaatattacacagttagtcgaagttctttcagatttcgaa
aagagagatcgtttatctaaacatttggaaattgcctctgaagataaggattcaaagatt
ttagtctttgcatcgacaaagagaacctgtgacgatattacaaaatatctaagagctgat
gggtggccagctttagccattcacggtgacaaagatcaaaaagaacgtgattgggttttg
aacgaattcagatgcggtagatcaccaattatggttgctaccgatgttgctgctagaggt
attgatgtcaaaggtattaacttcgttatcaactacgatatgccaggtaacattgaagat
tatgtccatagaatcggtagaactggtagagccggtgctaaaggtactgctatctctttc
ttcactgaagataacaagtccttaggtgccaaattaatttctattatgagagaagctaag
cagactattccaaatgagttgctcaaatacgacaagagacaaaactacggtggtcaccca
agatacggtggcggtcgtggtggccgtggtggttacggtagaggccgtggtggttacggt
ggtaactttggtggtaaccgcggttataacaggccaagagataatggctggggcagaggt
ggtaacaggtaa
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