Kazachstania africana: KAFR_0C01330
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Entry
KAFR_0C01330 CDS
T02487
Symbol
KAFR0C01330
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
kaf
Kazachstania africana
Pathway
kaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KAFR_0C01330 (KAFR0C01330)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0C01330 (KAFR0C01330)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KAFR_0C01330 (KAFR0C01330)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
ChrB_N
HycH
Motif
Other DBs
NCBI-GeneID:
13885046
NCBI-ProteinID:
XP_003956262
UniProt:
H2ARX7
LinkDB
All DBs
Position
3:complement(276359..279241)
Genome browser
AA seq
960 aa
AA seq
DB search
MSATRPELKFSDVSEERGFYRRFNSLPEKPSTKIRIVDKGEYYTVVGSDAVFVAENIYHT
QSVLKNCNVDQITLKGFKNEPPQYVTISQQVLSNLLKVCLLDSGYKVEIYDKNWKLLKSA
SPGNIEQVSELMNLNIEQSIVIASLKLQQNSKDGNNVIGVAFIDTSNFKIGMLDIVDNEV
YSNVESFLIQLGVKECLIQDQRSNENSAVEFKKLVSVIERCDCVASLLKNSEFSEKDVEL
DLVKLLGDELALSLPQKYSNISMGACNALLKYLQLVTEEEQIGKYELVEHSLKEFMKLDA
SAIKALNLFPQGPLQALGPSSIISMSPSSGGKIESLFQLLNNCKTNAGIRLLNEWLKQPL
TDLNLINQRHDLVEFLIDQLELRNMLQSDFLPLIPDVRRITKKLSKKGGLEDVLKVYQFS
KRVPEIAQLLESFVQDTDISEEMNSLINATWLTPLKSHLDPLSKLQEMVETTVDLEAYDE
SNVYMIKVEFNEELASIRNKLDSLRDEIKTIHLDAAEDLGFDPERKLKLENHHLHGWCMR
LTRNDAKELRKHKNYIELSTVKAGIFFSTRELKEIANETAILQKEYDKQQSTLVKEIVNI
TLTYTPVLEKLSLVLANLDVLSSFAHTSSYAPIPYVRPKMYGFGSTRKTKLLGSRHPVLE
MQDELTFIANDVVLENGTGEFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCDKAEIS
IVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNSTKNSLIIIDELGRGTGTYDGFGLA
WAIAEHIAANIGCFALFATHFHELTTLADKLANVKNMHVVAHIEQSESSHHDSDDITLLY
KVEPGISDQSFGIHVAEVVQFPDKIIRMAKRKADELEDLKKSNGELKKAKITMSELNDGN
LKLKKLLKDWVANVKKEDLNDPERFSDTQCQEKIQELLKTLTSEAVSTNDRYLEYLRTLL
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctacaaggccagaactgaaattttctgacgtgtcagaggagagaggtttttat
agaaggttcaactccttacctgaaaaaccatccaccaaaatccgcatagttgacaaagga
gagtattacacggttgtaggttcagatgcagtatttgttgccgaaaacatatatcataca
cagtctgtgttgaagaactgtaatgttgatcagataactttgaaggggttcaagaatgaa
ccaccacaatacgttacaatttcacagcaggttctaagcaatttactcaaggtgtgtcta
ttagactcaggttacaaggtcgaaatatacgataaaaactggaaattactaaaaagtgcg
tcaccaggtaatatagaacaagtttctgaactaatgaatttgaacattgaacaatcgatc
gttattgcatcattgaagctacaacagaattctaaagatggaaataatgttattggtgtt
gctttcattgatacttcaaattttaaaattggtatgttagacatcgtagataatgaagtt
tattctaatgtggaaagttttttaattcagttaggtgtcaaagaatgtttaattcaagat
caaaggtcgaatgaaaattctgctgtcgaattcaaaaagttggtaagtgtaattgaaagg
tgtgactgtgtggctagtctgttgaagaattcagaattctctgaaaaagacgtagaactg
gatctggtaaaattattaggagacgagttagctttatctttacctcaaaaatactctaat
atatcgatgggcgcctgtaacgctctgttaaaataccttcaactagtaaccgaagaggag
caaattggaaaatatgaacttgttgaacattctttgaaagaatttatgaaattggatgca
tccgccataaaagctcttaaccttttccctcagggacctcttcaagcattaggcccttcc
tctattataagcatgtctccatcatcaggtgggaagattgaatcccttttccagctttta
aacaactgtaaaacaaacgcaggaataagacttttaaacgaatggttgaaacaaccttta
acagacttaaacctaataaatcagagacatgacttggttgaatttttgatcgatcagtta
gaactaagaaatatgttacaaagtgactttctaccgctaatacctgatgttcgtcgtatc
acaaagaagctaagtaaaaagggaggtttagaggacgtcttgaaggtatatcagttttcg
aaaagagtaccagagatcgcccaattactagaatcatttgtacaagataccgatataagt
gaagaaatgaattctttgataaacgccacttggcttacccctttaaaatctcatttagat
ccattatcgaagctccaggaaatggtggaaactacagtggatttagaagcttatgatgaa
agtaatgtctatatgataaaggtggaatttaatgaggagctagcctcaatcagaaataaa
ttagatagtctacgagatgaaatcaaaacaattcacctagacgctgcagaggatttggga
tttgatccggaaagaaaactaaaattggaaaatcatcatctccatggttggtgtatgagg
ttaacccgtaatgatgcaaaagagctacgaaaacataagaactacatagaactttccact
gttaaagcaggtatatttttcagtactagagagctaaaagaaatagctaacgagactgca
attttacaaaaagagtatgacaaacaacagtctacattggtaaaagaaatcgtaaatatc
actttaacctatacccctgtacttgagaagctttcgttagttttagccaacttagatgtt
ctatcttcatttgctcacacctcctcatatgctccaatcccttacgtgagacctaaaatg
tacggctttggctctaccagaaagactaaattattggggtcccgtcatcccgttttagaa
atgcaagatgagctaactttcatagctaatgatgttgttttagaaaatggtacgggggaa
tttttgattatcacaggaccaaatatgggtggtaaatcgacctacataaggcaagttggt
gtgatttccttaatggcacaaattggttgctttgttccatgtgataaggctgaaatttca
attgttgatgctatcttatgtagggtgggagctggcgattctcaattgaaaggtgtttct
acatttatggtagaaatgcttgagaccgcatcaattctgaaaaactcaactaagaactcc
ttaattatcatagatgaacttgggagaggcactggcacatatgacggatttggccttgct
tgggctatagcagaacatattgcagcaaacattggatgttttgcattatttgcgactcat
ttccatgaattgactacactagccgataaattagcaaatgtcaaaaatatgcacgttgta
gctcacatcgaacaaagtgaaagtagtcatcatgacagtgatgatatcactttgctctac
aaggttgaacccggtatctctgatcaatcattcggtattcatgtcgcagaggttgttcaa
tttcctgataagattattaggatggcaaaacgaaaagctgatgaactagaggatttgaaa
aaaagtaatggagaactgaagaaagccaagattaccatgagtgagttgaacgacggtaac
ttgaagctaaagaaattgctaaaagattgggtagccaatgtaaagaaagaagatttgaat
gatccagaaaggttttctgatacgcagtgccaagaaaaaattcaagaactattgaaaaca
ttaacttcagaagctgtttccaccaatgatagataccttgaatacttacgtacactttta
tga
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