Kazachstania africana: KAFR_0C02470
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Entry
KAFR_0C02470 CDS
T02487
Symbol
KAFR0C02470
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
kaf
Kazachstania africana
Pathway
kaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAFR_0C02470 (KAFR0C02470)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0C02470 (KAFR0C02470)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KAFR_0C02470 (KAFR0C02470)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KAFR_0C02470 (KAFR0C02470)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
13885159
NCBI-ProteinID:
XP_003956375
UniProt:
H2AS90
LinkDB
All DBs
Position
3:complement(479994..482387)
Genome browser
AA seq
797 aa
AA seq
DB search
MSHRKLQQEMDKVFKKINEGLEIFNDIYERHDSCNNNQSQKEKLESDLKREIKKLQRLRE
QIKSWQSSNEVKDKDSLLDYRRSVEVAMEKYKIVEKASKEKAYSNISLKKSDTLDPEEKE
RQEVSTYLLNSIDELDRQFEALQIEVDKLQLLNKKKKTYSAANDEKIRDLKSLQSRFRWH
QQQIELALRLLANEELEVQKVNNIRDDLNYFIEANQDADFIEDETIYDNLDLQSNEAIAH
EVAKYFASQKLVDDADDDSSINNESVPSTPSSKKKADDSTLSSDEAAKKSKKELRKLERE
AKKAAKLAAKSAHASAAALGATPVINTTPILPPQERLSPSPAPSVTNNKPSEPSTEKNPD
IVHTHIHQGLNGVTSSTILKPAPIPSKPVGESKWSTIAAASHNQSIELVKSDSTTSTPIS
ANAMLVNNAKEKSTSPLISPSPIENNQHHTSSLESLIGNNNASSAQTAAAVLAAGAAAVN
QNNQQYHNKQSGFSNDQLLVTASQTKNEVDQDKRNYIDSTAHKNDDDYVELTCNSSIFNS
DSETEYETDYEDERELLQQSQLETDSTNKSRQTPELNYLNDFHSLILPNGIKEYIMSYEI
NNDNPKRSKIKRSVELCNIDRLNDIPAGVNPPNPLDAFRSTQQWDLIRCNLKDLESLSLN
DVLGNFKNLEMFSLFYNYYFAITPLEKKISFELLIQKNWKISKDETMWFLRQNVIKFQNE
NFEISDFKIFKLDDWSVIDKINFRLDYSQLKYIDNEIKQNLQSHNSTNNSVTIDSDALTH
GQQLLQQLKQTRDEPSI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatagaaaattgcaacaggagatggataaagtcttcaaaaagataaacgaaggt
ttagagatctttaatgacatttatgaaagacatgattcttgtaacaataaccaatctcaa
aaggagaaattagaatcagatttgaaaagagaaataaaaaagctgcaacgattgagggaa
caaatcaaatcgtggcaatcttcaaatgaagttaaagataaagattcattattagattat
agacgatcggtagaggttgctatggaaaaatataagatagttgaaaaagcatcgaaagaa
aaagcttattcaaatataagtctgaaaaaatctgatactttagaccctgaagaaaaggaa
agacaagaggtttcgacgtatcttttgaattcgatagatgaactagatagacaatttgaa
gctttacagatcgaagttgataaattgcagctcttaaataaaaagaagaaaacttattca
gcagcaaatgatgaaaaaataagagatttaaaatctttacaatcgcgatttagatggcat
caacaacagattgaattagctttgagattactagctaatgaagagctagaagtccaaaaa
gtaaacaatatcagagacgatttaaattattttattgaagcaaatcaagatgccgatttt
atagaagatgaaactatctatgataatcttgatttacaatcaaatgaagctattgctcat
gaagtggccaaatattttgcatctcaaaagctggtggatgacgctgacgatgattccagc
atcaacaatgagagtgtacccagcacgccgtcttctaagaaaaaggcagatgacagtacg
ttatcttcagatgaagcggcaaagaagtccaagaaagagttgagaaaacttgaaagggag
gcaaagaaagctgccaaattagcagccaaaagcgcgcatgccagtgctgcagcattagga
gccactcctgtcatcaacaccactccaattttaccgcctcaggagaggctgtctccttct
ccagctccatccgtaactaataataaaccatctgagccatctactgaaaaaaaccccgac
atcgtgcatacacatattcatcagggactaaatggtgtaacaagttctacaatcttaaaa
cctgctccaattccatcgaaaccagttggcgaatccaaatggtccacaattgcagcagct
agtcataatcaatctatagaattggtaaaatcggattcgacaacgtcaacacctatatca
gccaatgctatgttggttaataatgctaaagaaaaaagtactagtcctttgatctctccc
tctcctattgaaaacaatcaacatcacacttcttcattagaatcactgattggtaacaat
aatgcatcatctgctcaaacagcggctgcagtattagctgcaggggctgcagcagtcaat
cagaataaccagcaatatcacaataaacaaagtggcttttcaaatgatcaattgcttgtt
actgcatctcaaacaaaaaatgaagtggatcaagataaaagaaattacatcgattccact
gctcataagaacgatgatgattatgttgaattaacttgcaactcctcgatcttcaactct
gattcagaaacggagtatgaaacagattatgaagatgaacgagaactgctacaacaaagt
caactagaaacggattctacaaataaatcacgccaaacgccggagttgaactacctcaat
gatttccattctttaattttacctaatggtatcaaggaatacataatgagctatgagatc
aataatgataatcctaaaaggtctaaaatcaaacgcagtgtcgaactctgtaatattgac
cgattgaacgatataccagcaggtgtgaatccaccaaatccattggatgcatttagatca
acacaacaatgggatttgattcgctgtaatttaaaggatctagaatctttgagtctcaac
gatgttttaggaaattttaaaaatttggaaatgttcagtttattttataattattatttt
gccattacacctctagaaaagaaaatttcttttgaattgttgattcaaaaaaattggaaa
atttctaaggatgagactatgtggtttctaaggcaaaatgttataaaatttcagaatgaa
aattttgaaataagtgatttcaaaatatttaaactggatgattggtctgtaatagataag
ataaatttcagattggattattctcaactgaaatatattgataatgaaataaagcagaat
ttgcagagccataatagtacaaacaacagtgtgacgatagacagtgatgcactgactcat
ggacaacaacttctacaacaattaaaacagaccagagacgaaccaagcatatga
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