Kazachstania africana: KAFR_0D01120
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Entry
KAFR_0D01120 CDS
T02487
Symbol
KAFR0D01120
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
kaf
Kazachstania africana
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kaf03009
]
KAFR_0D01120 (KAFR0D01120)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAFR_0D01120 (KAFR0D01120)
Ribosome biogenesis [BR:
kaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
KAFR_0D01120 (KAFR0D01120)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
AAA_22
ApoB100_C
Motif
Other DBs
NCBI-GeneID:
13885716
NCBI-ProteinID:
XP_003956893
UniProt:
H2ATQ8
LinkDB
All DBs
Position
4:complement(222704..224536)
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AA seq
610 aa
AA seq
DB search
MSKSLDWDSLNYELLPWIKNAIEVMGYDQMTPVQASTIPMFVGNKDVVVDSVTGSGKTVA
FVIPILEKIVKEATHLKKGHFHSLIISPTRELSRQIQTVINSFLQHYPDSETKPIKSQLL
VGTDTKTIRDDVASFLEERPSILVGTPGRVLDFLQIASVKAQLCSMVVLDEADRLLDISF
SKDIEKILSFLPKQRRTGLFSATITSAGSNIFKTGLRNPVKIKVNSKNNSPTSLSLNYCV
VDTHDKLIHLLNLLNNYRFKKCIVYFPTCISVTFFYGFIQYLQKQNNSVLTIDESLQFYS
LHGKLQTSSRIKTLEAFTEDLNNSVLFTTDVAARGIDIPDVDLVIQLDPPTDSDIFMHRC
GRTGRANKIGKAITFINSGREEDFIPFMEVKNVTLEPMNEVLKEISEETSNNFYDLFKKW
ILQDRARFDLSIKSYVAFIRHYSNHTASSIFRLQNFSYTGLAKMYGLIRIPRMPEVTKYL
QKSDVLEVYDDGWLVTPPIDLNKFSYADKKREQARLQELENLRKIQDKKKLKFDLKKKNM
AWSNKVATKESKSIRREKMSLKRKLIEEELANQSSSDDDDNIVTQDWKEEIMQNKRKKKD
TGIQGSFDDL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcgctagactgggattctttaaactatgagctgcttccctggattaaaaac
gccatcgaagtaatgggatacgatcaaatgaccccggtccaagcttctaccataccgatg
tttgtgggtaataaggatgttgtagtagattcagtgacaggttcgggtaaaacagtggct
tttgttatcccaattctcgaaaagatcgtcaaagaagccactcatttaaagaagggccat
ttccattctttaatcatttcaccaacaagagaattatcgagacagatccagacggttatt
aattcattcctacaacattatcctgacagtgagactaaaccgatcaaatcacagctgctg
gttggtacagacacaaagaccatcagagatgatgttgcgtcatttctcgaggaaagacct
tccattcttgtgggcaccccaggaagagtcttagattttttacaaatagcatcagtaaag
gcacagttatgtagtatggtcgtattggatgaggctgataggttattagatatcagtttt
tcgaaagatattgagaaaatattgagtttcttaccaaaacaaagaagaactggcctgttt
tcggctactatcacgagtgcgggcagtaacatctttaaaacaggtcttagaaatcctgtt
aaaattaaggtcaactccaaaaataattctccaacatccttatcattaaactactgtgta
gttgacactcatgataaattgattcatttactcaatcttttgaataattacagattcaaa
aaatgcattgtatattttccaacttgcatttcagtcacatttttctatggatttattcaa
tatttgcaaaagcaaaataactctgtcctgactatagatgaatctttacaattctattcc
ctacatgggaaattacagacaagttcaagaatcaaaacattagaagcattcacagaagat
ttaaataattctgttctcttcacaacagacgttgcagcaagaggtatcgatattccagat
gtcgatctcgttattcaattggatccaccaacagactccgatattttcatgcatagatgc
ggtagaactggtagagctaataaaattggtaaggcaattacattcataaacagtggtaga
gaagaagattttattccgttcatggaagttaaaaacgtcactttggaacctatgaacgag
gttttgaaggaaattagtgaggagacatctaataatttttatgacctcttcaaaaaatgg
attttacaagatagagctagatttgacctctcaataaaatcctatgttgcatttattagg
cattattcgaatcatacagcatcttcaatattcagattgcaaaattttagctacacaggt
cttgctaaaatgtatggtttgatcagaataccgcgtatgccagaagttacaaaatattta
caaaaatctgacgttctagaggtttatgatgatggatggctcgttactccaccaattgat
ctgaataaattttcctatgctgataagaaaagggagcaagcgaggctacaagaactagaa
aatttacgaaagattcaagacaagaagaaactgaaatttgacttgaagaaaaaaaatatg
gcctggtcgaataaagtagctacgaaggagtcgaagtctataagaagagaaaaaatgtct
ctcaagagaaaattaattgaagaagagttggctaaccaaagctccagtgacgatgatgac
aatatagttactcaggactggaaggaagaaatcatgcaaaataagagaaaaaagaaggat
accggtatacagggtagttttgatgatttatga
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