Kazachstania africana: KAFR_0D01890
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Entry
KAFR_0D01890 CDS
T02487
Symbol
KAFR0D01890
Name
(RefSeq) hypothetical protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
kaf
Kazachstania africana
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0D01890 (KAFR0D01890)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KAFR_0D01890 (KAFR0D01890)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
KAFR_0D01890 (KAFR0D01890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA
DEXQc_Suv3
Helicase_PWI
MotA_ExbB
Motif
Other DBs
NCBI-GeneID:
13885794
NCBI-ProteinID:
XP_003956971
UniProt:
H2ATY6
LinkDB
All DBs
Position
4:complement(376752..382640)
Genome browser
AA seq
1962 aa
AA seq
DB search
MMTSYSVHSSKSFMEAMQSMIQASELFNVDLSKIVVPEYDNSKNVKDKEPEGTKLAVLAQ
DKNEWDDIYEEFNDISFEKLNDIISSYNEEDSLKVFKNLSRLLNTCSTELPKDILPESTL
QLLFTHETIDLEKELLNLLGTENIELISFLLQNKAKITSQPLDNVLWLINNSDDSNTHLT
EEDIRNQVLENARIAKNQKLDQAEKIIKYPHVFRKYESNTTSSLSFSGQKFSLPVGTTRQ
SLQTHEEIIIPAADSSNSRPFLYTKLLEVEDLDEYCKAVFNYDTLNQIQSLVYPVAYNTN
ENMLVCAPTGAGKTDIALLTILNNIKQFSSVNEEGEIDIQYDDFKIIYVAPLKALAAEIV
SKFSKKLSVFDIKVRELTGDMQLTKAEILETQVIVTTPEKWDVVTRKANGDNDLVSKVKL
LIIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRILGLSATLPNFMDVADFLGVNRQV
GMFYFDQSFRPKPLEQQLLGCRGKDGSKQSKENLDSVSYKKLIEMVRQGSQVMVFVHSRK
ETSKSAKTFIKMAQENNETDLFCPSPSTKDLYSKQIAKNRDKDLKEIFQFGFGTHHAGMS
RSDRNLTEKLFKEGAIKVLCCTATLAWGVNLPADCVIIKGTQIYDSKKGGFVDLGISDVI
QIFGRAGRPGFGSSHGIGILCTSSASLDHYVSLITQQHPIESRFGAKLVDNLNAEISLGT
VTNVDEAIQWLGYTYMFVRMRKNPFTYGIDWEEIASDPQLYDRRKKMIITAARRLHSLQM
IVFDEVSMHFTAKDLGRVSSDFYLLNESVEIFNQMCNPKATEADVLSMISYSSEFDGIKF
REEEASELTRLTDNSVECQIAGAADTPQGKTNILLQAYISQARIFDSALSSDSNYVAQNA
VRICRALFLIGVNRRWGTFSKVMLNICKSIERRLWSFDHPMCQFDLPEPILGQLRSKNPS
MEHLLDLEEDELGELVHNQKMGRKLYTLLSRFPKIIIESEIFPITTNVMRIHVSLEPAFI
WDIRIHGDAQFFWVFVEESNKSEILHFEKFILNRRQLKHAHEMDFMIPLSDPLPPQVVIK
VVSDTWIGCENTNVVSFQHLIRPYNETLQTKLERLRPLPVSALHNPLVESIYPFKYFNPM
QTMVFHTLYNTSENVFVGSPTGSGKTVVAELAIWQAFRDFPGSKIVYIAPMKALVRERVD
DWRKKITPVTGDRVVELTGDSLPDPQDVRDATIIITTPEKFDGISRNWQTRRFVQSVSLV
IMDEIHLLASDRGPILEMIVSRMNHISSQTAQPVRLLGMSTAVSNAHDMAGWLGVKNNGL
YNFSSSVRPVPLKMYIDGFPDNLAFCPLMKTMNKPAFMAIKQHSPDKPALIFVASRRQTR
LTALDLIHLCGMEDNPRRFLNIDNDDELRYYLSQVTDETLKLSLQFGIGLHHAGLVEKDR
SISHHLFQNNKIQILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMG
RAGRPAFDTSGTAIVYTKNSKKMFYKHFLNVGFPVESSLHKVLDDHLGAEIASGSIKTKQ
DALNFLKWTFFFRRAYHNPTYYGIEEDTSAAGVNKHLSNLIDKTLESLSESQCVSIQGKK
IIPTPFISISSYYYISHLTVRKLLEQLYDNATFQDVLKWLSMAVEYNELPVRGGEIIMNV
EMSAQSRYSVESTFTGDHELPMWDPHVKAFLLLQAHLSRVDLPIADYVQDTISVLDQSLR
ILQAYIDVASELGYLGTVMAMIKVMQCVKQGCWYEDDPIGLLPGMDLKRRTDKTFNQSGF
AVDNVETKKNLLDLDKIGRLGFSKLQNVMNKLNVAEEERKNFSYVCQRLPVLNDIKFDEQ
TDSSSLTLTAKHAFNKTNRGFEVYCDKFPKTQKELWFCIGYQGNELLMIKRCQPRQNGKD
VSIICDLLIPEELEVEELNFVLINDALDLKYQLRHKLIGSSN
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctcttattctgtacactcctcgaagtctttcatggaggcaatgcagagtatg
attcaagcctctgaattgttcaacgtggatctttcgaaaattgtagttccagaatatgat
aatagcaaaaacgtcaaggataaagagccagaaggcactaagttagctgttttggcgcaa
gataaaaatgaatgggacgacatttatgaagaatttaacgatatttcctttgaaaaattg
aatgacattataagttcttataatgaagaggattctttgaaggtattcaaaaatttatca
aggctcctaaacacttgttccacggaactaccaaaagatattctacctgagtcaacattg
cagctcttatttactcatgaaactattgatttggaaaaagaactactcaatttactggga
acagagaatatcgaattaatatcatttcttctacaaaataaagcaaaaattacctctcag
ccattagataatgtactgtggcttataaataattcagatgattcgaatacgcaccttaca
gaggaagatatccgaaatcaagtacttgaaaatgcacgtattgcaaaaaatcagaagttg
gatcaagctgaaaagataataaaatatccccatgtattcagaaaatatgaatccaacacc
acttcatccttgagtttttcggggcagaagttttctcttccagtgggaacaacaaggcaa
tctctacagacacatgaagaaattatcattccagccgctgattcttctaattcaagacct
tttctttatactaaattattagaagtcgaggacctagatgagtactgtaaagcagtattt
aattatgataccttaaatcaaattcaatccctagtttatccggttgcttacaacacaaat
gagaatatgttagtgtgtgctcctacaggtgccggtaaaaccgatattgcattactgacg
attttaaataatataaagcagttttcttccgtaaatgaagagggtgaaattgatatccag
tatgatgatttcaaaattatctatgttgctcccttaaaggcccttgcagcagaaattgtc
tcgaaattcagtaaaaagttgtcagtttttgatataaaagtgagagaacttacaggtgat
atgcagctcacgaaagcagaaatacttgaaacacaagtaattgttacaactcctgaaaaa
tgggatgttgtaacacgtaaggccaatggtgataacgaccttgtttcaaaagtgaaactg
cttattatagatgaggttcatctgttacatgaagataggggttctgttattgaaacgtta
gttgctcgtactttaagacaggtggaaagctcgcaatctatgattcgaattttgggtctc
tcagcaactttaccaaattttatggatgttgctgactttttaggagtcaataggcaggtt
ggtatgttttactttgatcagtccttccgtcctaaaccattagagcaacagttacttggt
tgccgtgggaaagatggcagtaaacagagtaaagaaaatcttgattctgtttcgtataaa
aagttgattgaaatggtacgacaaggttctcaggtcatggtttttgtccattcaagaaaa
gaaacatctaagagtgccaagacatttattaagatggcccaagaaaataatgaaacagac
ttattttgtccaagtccttcaacaaaagacctctactcaaagcaaatagcaaaaaacaga
gataaagacttgaaagaaatatttcaatttggtttcggtactcatcatgccggtatgtct
cgttctgatcgtaatctcacagaaaagttattcaaggaaggagctatcaaagtattatgc
tgtacggcaacgctcgcttggggtgtcaacttgccagctgattgtgttattatcaaaggt
acacagatatacgactcaaagaaaggtggttttgtggaccttggaatttcagacgttatt
caaatatttggccgtgctggtagacctggttttggttcttcccacggtattggtatttta
tgtacatcaagcgctagtttagatcattacgtatctttgataacacagcaacatccaatt
gaatcgagatttggcgctaagctggtagataatttgaatgcagaaatatctttaggtaca
gtgacaaatgtggacgaggctatccagtggcttggttatacatatatgtttgtacgcatg
aggaaaaacccattcacatatggtatcgactgggaagagatcgcttcggaccctcaacta
tatgacaggaggaagaaaatgattattactgcagcaaggagattacactctttacagatg
atcgttttcgatgaagtgtccatgcattttactgctaaggatctgggcagagtttcatct
gatttctatttgttgaatgaatctgttgagatctttaatcaaatgtgcaacccaaaagcc
actgaagcagatgtcctttcaatgattagttacagtagtgaatttgatggtattaaattc
agagaagaagaagcctcggagctgactaggctgacagataattcagttgaatgtcaaata
gcgggggctgctgatacaccgcaaggaaagactaatattttgctacaagcttatatatcg
caagcaagaatatttgattctgctttatcatcagactccaactatgtcgctcaaaatgct
gtgagaatttgtcgagctttgttcttgatcggtgtcaataggaggtggggtactttttcc
aaagtaatgttgaacatatgtaagtctattgagagaagactttggtcatttgatcatccc
atgtgccaatttgatttaccggagcctattctcggccaacttcgaagcaaaaacccttct
atggagcatcttcttgatttagaagaggatgaattaggcgagctagtccataaccagaaa
atggggcgtaagttatatacactattaagccgttttccaaaaattatcatagaatccgaa
attttccctattaccaccaatgtcatgcgtattcatgtttctttagagcctgcttttatt
tgggatatcagaatacatggtgatgcccagtttttctgggtatttgttgaagaatccaat
aagtcagaaattcttcattttgaaaagttcatattaaaccgaagacagctgaagcacgct
catgaaatggatttcatgatcccattgtctgatccattaccgccacaagttgttataaag
gtcgtttctgacacttggataggttgtgaaaatactaatgtcgtctctttccaacatttg
atccgaccatacaatgaaacattacaaacaaaattggagagattgaggcctttgccagta
tctgctcttcataatcctctggttgaatctatttatcccttcaaatattttaatcctatg
caaactatggttttccatactttgtataatacatccgaaaatgtgtttgttggttcacct
acaggttctggtaaaactgtcgttgctgaacttgcgatttggcaagcatttagagatttt
ccaggctctaaaattgtatatattgctcctatgaaagctttggttcgtgaaagagtggac
gattggagaaaaaaaatcacacctgtcacgggtgatagagttgttgaattaactggtgat
tctctcccagacccacaggacgtcagagatgctactattattattactacgcctgaaaag
tttgacggtatctcacgtaattggcagacgcgtagatttgtacaaagcgtttctctagtt
atcatggatgaaattcatttgttagctagtgatcgtggcccaatcctagaaatgattgtt
agtcgtatgaatcatatatcttctcagactgctcagcctgtccgtttattaggcatgtca
acagctgtgtctaatgcacacgatatggcaggctggttgggtgtcaagaacaatggtctt
tataatttttcttccagcgtacgtcctgtgccattaaaaatgtacattgatggttttcca
gataatttagccttctgtcccttaatgaaaacgatgaataagccagcgtttatggctatt
aagcaacactccccagataagccagccctgatttttgtagcgtcccgtaggcaaacaaga
ttaacggcgttagatttgattcatctttgtggtatggaagataatccaaggaggtttttg
aacattgataatgatgatgaattaagatactatctttcacaggtaactgatgaaaccttg
aaactgtctctgcaattcggtattggtttacatcatgctggtttagttgaaaaagatcgt
tccatctcgcatcatttattccaaaataataagattcaaattcttattgcaacttctact
ttggcgtggggtgttaatttaccagcacatctagtcattattaagggtacgcagttcttc
gatgcaaagatcgaaggatatagggacatggatctgactgatatattacaaatgatgggt
agggctggtagaccagcatttgatacttcaggtaccgccattgtctatacaaagaactcc
aaaaagatgttttataagcactttctaaacgttggatttccagtagaatcatccttacac
aaggtattggatgatcatttgggtgcagaaattgcctctgggtcaatcaaaaccaaacag
gatgcgttgaatttcttaaaatggacattctttttccgtagagcatatcataatccaaca
tattatggtattgaagaagacactagtgctgctggagtaaacaagcacttgagcaatctt
atcgataaaacattggaaagcctatctgaatcacaatgtgtttccatccaaggcaaaaaa
attattccaacaccattcattagcatctcatcttattactatatttctcatttaactgtg
cgtaaattattagagcagctatatgataacgctactttccaagatgttctaaaatggtta
tcaatggctgtcgaatacaatgaattgcctgttagaggtggtgaaattatcatgaatgta
gaaatgtcagctcaatctagatattctgtagaaagtacgtttactggagatcatgagttg
ccgatgtgggatccacacgttaaggcgtttttgctgttacaagctcatttaagccgtgtt
gatttaccaattgctgattatgttcaagatactatatctgtattagatcaatctttacgt
atcttacaggcgtatattgatgttgccagtgaattaggctatttgggcactgtgatggca
atgataaaagttatgcaatgtgttaagcaaggttgttggtatgaagacgacccgattggt
ctgttgccaggaatggatctgaaaagacgaacagataaaacttttaatcaaagtggattt
gcggtcgataatgttgagacaaagaaaaatcttttggatttagataaaattggtaggctt
ggatttagcaaactacaaaatgtcatgaataaactaaatgttgcagaagaagagagaaaa
aacttttcatatgtgtgtcagagattgcctgttttgaatgacatcaaatttgatgagcaa
acggattcttctagtttgacgttgactgctaagcacgcattcaacaagacaaatagaggt
tttgaggtatattgtgataaatttccaaagactcaaaaagagctttggttttgtattggt
tatcaagggaatgaattgttaatgatcaagagatgtcagcctagacagaatgggaaagac
gttagtatcatttgtgatttattgatacccgaagaattagaggttgaggaactaaatttt
gtattaatcaatgatgctttggatttgaaatatcagttaagacataaactgatcggctct
tcaaattga
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