Kazachstania africana: KAFR_0D03570
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Entry
KAFR_0D03570 CDS
T02487
Symbol
KAFR0D03570
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
kaf
Kazachstania africana
Pathway
kaf03082
ATP-dependent chromatin remodeling
kaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
KAFR_0D03570 (KAFR0D03570)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
KAFR_0D03570 (KAFR0D03570)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kaf01009
]
KAFR_0D03570 (KAFR0D03570)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0D03570 (KAFR0D03570)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0D03570 (KAFR0D03570)
Protein phosphatases and associated proteins [BR:
kaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
KAFR_0D03570 (KAFR0D03570)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
KAFR_0D03570 (KAFR0D03570)
SWI/SNF complex
KAFR_0D03570 (KAFR0D03570)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
KAFR_0D03570 (KAFR0D03570)
PBAF complex
KAFR_0D03570 (KAFR0D03570)
SWI/SNF complex
KAFR_0D03570 (KAFR0D03570)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
13882250
NCBI-ProteinID:
XP_003957140
UniProt:
H2AUF5
LinkDB
All DBs
Position
4:697297..699972
Genome browser
AA seq
891 aa
AA seq
DB search
MNGNKQNGSPMDSLASNDNSQGNAKSTSNANIQRNYFNNIGTPAFNFSQIPQEVLSNLTP
AQLRLIQQKHQQLLVSRIQQQQQQQQQQQQQQQPMPSSTGDNSNMNANNSSANNLSPNSN
VNPNPAAIMQQMNVQQRLAQMSQQQQNSQQPPPQQQFQQQTHLTQSNQSPASPVNSQPQV
NLPPQIAQLPLPTQVQVLTSLKQQAMAKNNPTAVSTISMALQHVQRQLQAQQGPAQNLSN
NTTRSPSVATDIPPQYMNKQDSPQLGSRTNMVQQGVPQQFLQQQAHAMQTKHKSIKQQHQ
QQQQQNMQFIQQPQQQFQQQTPTSQAPPPMPPMTMPKLDLPKYQTIKYDPPEIKLPVSNY
WSLKDKKNSTTDTLLYEQIIKRDKSFKESQKKEISGYEPFSIYGFSNKEYIAKQFHSLKY
YQDLKNTRMHSITSTSNNTPSASIWGNGYSGYGNGTTNTTTNVVSEHKNTGRKHYHVNEE
LYYKLEMNTENKDDDYENLVPIRLEFDQEKDKFFLRDTLLWNKDEKLIKLDDFVEDMLLD
YRFDNIRVNQFSEVVKQSIKEQISEFQPNPYVKLAKDRIGGDDLRIKIKLDIVVGHNQLI
DQFEWDISNAENCPEEFAENMCQELQLPGEFATAISHSIREQVHMYHKSLALLGYTFDGL
PVEDDEVRSRLLPMITLDGIFRPPNDAKNYTPNLLQISAAELDRLDKDKDRDTRRKRRQG
RFNRRGLGLFSSASNANLTASSLTASSLNTGGASNAAAQAEILLPDISDIPRTFRTPMPS
TIAPGGVDLGPSVSSYDIKTNVTYSPRPEKPKPYMGPCYIVDNIPGKTLLLSIKIPPTKL
RDTLALKREATEPKIDDVIAPQHESQQALQPTSPPLQPDDKKGSENTPISN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaataaacagaacggatcacccatggattcgttagcgtctaacgataatagt
caaggaaatgcgaaaagtactagtaacgccaatatccaaagaaactatttcaacaatata
ggaactcctgcgtttaacttttcacagattcctcaagaagtactttcaaatctcacccct
gcacaactgagactgattcaacagaagcaccagcaacttctggttagtcgaatccaacag
cagcagcagcagcagcagcaacaacaacaacaacaacaaccaatgccatcctcaacagga
gacaactcaaatatgaacgcaaacaattcttctgctaataacctgagcccaaactcgaac
gtcaatccaaatcctgccgctataatgcaacaaatgaatgttcaacaaagactcgctcaa
atgagccaacaacagcaaaattcgcaacagccaccacctcagcaacagtttcaacagcaa
acacatctcactcaatctaatcaatcaccagcatctccagtgaattcacaacctcaagtg
aatttaccgccacagattgcccaattacctttaccaactcaagttcaggttttgacctct
ttaaaacagcaggctatggcaaaaaataatccaacagcagtctccaccataagtatggcg
ttacagcatgtacaaagacaactgcaagctcaacaaggcccggcccaaaacctatcgaac
aatacaacgcgttcgccttcggttgctaccgatataccaccacaatatatgaacaaacag
gactcaccacaattaggatccagaactaatatggtgcaacagggagttccacaacaattt
ctccaacagcaagcgcatgctatgcaaacgaaacataaatccataaaacagcaacaccag
caacaacaacagcaaaatatgcaatttatacagcaaccgcagcagcaatttcagcaacaa
acgccaacttctcaggcacctcctccaatgcctcctatgactatgccaaaattagattta
ccaaaatatcaaacaattaaatatgatccacccgaaattaaattacctgtgtcaaattat
tggtctttgaaggataaaaaaaatagcactactgatacgctattgtacgaacaaataatc
aagagggataagtcatttaaagagtcacagaaaaaggaaatttcaggatatgaacctttt
agcatatatggattcagtaataaagaatacatagcgaaacaatttcacagtctgaagtat
tatcaagatctgaaaaatacaagaatgcattctattacctctacatcgaacaatactcct
tccgcgagtatatgggggaatggttacagcggatatggtaacggtaccactaacactaca
acaaatgtggtatctgaacataaaaatactgggaggaagcattatcatgtgaatgaggaa
ttatattataaactagaaatgaacaccgaaaataaagatgatgattacgaaaatcttgta
cccataagattagaattcgaccaagaaaaggataaattttttctaagagatactttatta
tggaataaagatgaaaaattaatcaaacttgatgattttgttgaagatatgctactggac
tatcgttttgacaacattcgtgtaaaccaatttagtgaagtggttaagcaaagtattaaa
gaacaaatatcagagtttcagcccaatccatatgttaaattagccaaagatcgtatcggt
ggtgacgacttacgtataaaaattaaactagatatagtagtaggacataatcagctgatt
gatcaattcgaatgggatatatcaaacgctgaaaattgtccggaagaatttgcggaaaat
atgtgccaggaattacaattaccaggtgagtttgctaccgctatcagccattctataagg
gaacaggttcacatgtatcataagtcattagcgctattaggttatacatttgatggatta
ccagtagaagatgacgaagtaagaagtagacttctcccgatgattacattagatggtatt
tttagaccgccaaatgatgctaagaattacacaccaaatcttttgcaaatatctgccgca
gaactggacagattggataaagataaggacagagacactagacgcaagaggagacagggt
cgtttcaataggcgtgggttgggtttgttcagcagtgcaagcaatgctaatctaactgca
tcatcactaactgcgtcatctttgaacactggaggtgcatctaatgctgcagctcaagct
gaaatattattacctgacatatccgacataccaagaacattcagaacacctatgcccagt
accattgcacctggtggagttgatcttgggccctcagtcagttcctatgacatcaaaact
aatgtaacatatagtccaagaccagagaagcctaaaccttacatgggcccctgttatatt
gtagataacattccaggtaagaccctgttattgtcgatcaaaatcccaccaactaagtta
agagatacattggccttgaaacgagaagccacggagcccaagatagacgatgttatcgct
ccgcaacacgaatcacaacaggcattacaacctacatcgccaccgttacaaccagatgac
aagaaaggtagtgaaaacacacccataagcaactga
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