Kazachstania africana: KAFR_0D03760
Help
Entry
KAFR_0D03760 CDS
T02487
Symbol
KAFR0D03760
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
kaf
Kazachstania africana
Pathway
kaf03440
Homologous recombination
kaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KAFR_0D03760 (KAFR0D03760)
03450 Non-homologous end-joining
KAFR_0D03760 (KAFR0D03760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kaf03032
]
KAFR_0D03760 (KAFR0D03760)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0D03760 (KAFR0D03760)
DNA replication proteins [BR:
kaf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
KAFR_0D03760 (KAFR0D03760)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
KAFR_0D03760 (KAFR0D03760)
BRCA1-C complex
KAFR_0D03760 (KAFR0D03760)
NHEJ (non-homologous end-joining)
MRX complex
KAFR_0D03760 (KAFR0D03760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_16
AAA_22
AAA_13
Motif
Other DBs
NCBI-GeneID:
13882269
NCBI-ProteinID:
XP_003957159
UniProt:
H2AUH4
LinkDB
All DBs
Position
4:complement(726654..730559)
Genome browser
AA seq
1301 aa
AA seq
DB search
MSAIYKLSIQGIRSFDSNDRETIEFGTPLTLIVGTNGSGKTTIIECLKYATTGDLPPNSK
GGVFVHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQLLAKKTTNTFKTLEGQLVAIS
RSGGRTTLSTRATELDTQVPLYMGVPKAILEYVIFCHQEDSLWPLSEPANLKKKFDEIFQ
AMKFTKAIDNLKIIKKDMAVDIKLLKQSVEHLKVDRDRSKNTKRSLHNLEAKYAEYQEDV
KAIEVKLNDITRRSDELFKSNQDFQEVLSKSENLKTLESLTSNEIERLSSSINAINLGKS
ELQDLLDNFSNTLHEKELEVQRFEEELFAMKDKSKEFQNNSNSLARRQGELEAELNKYAL
NKTRLTDLQSQMSTRYGFEVSVEASNFIDQLKHYKEKFCSDLDRFEETESQKIKDQEEKL
SKVIYSDTVQAQKLDYYKADKNKLLDEISNMESEIITSEYSEDDLEKEKKILAETTLKLE
EWEKSDVIKQMGAQLKEKNEQILLAENDLEEIQDKIKKTNQQADLFAKLGLLKKSIAEKS
QALENASTSLENNSKAKSWNLMSNDDLDIDFKKIYINLQKQIALSNRELHECEKKFTESS
YNLTTLQNDLVTNQKTENDIKRNLENALPEDCPLGEYDKIIEEAELSYRTALENLKMHQT
TLDFNRKALEVAEYDNSCYLCLRSFDTVEFKNEILQNLKAKTEAKFETALKEVVKEEKEF
LDSLRSLEKDFTLLNSSWERINKIKIDSKKAQELTTSLREQLLTMETKNNELKEDQVLVE
KELRAYVETIITLKKELKQLDAESSQILEQLKIYGSSDGEVFTVDELQQLQKNKSDHLRG
LRKAINELQMAREGKIRGHSALITTIKKKTMAINEMERSLVRKQNTENNMKSKRNRIKEI
ESKLGQLTSEVDELHSQRIFLEQETNNVKAEFNSKMSSKRDTLNKINNDINTVSSIWNEI
TQYDESLLSQCTRELERSELELAELNQQIDFKNNELNDQKQKLKDSNNEKRNLSQNIELL
DLKKKLNDIKSQINSLDIQNAKAKRDKYQHESSQLRNEYEKLSAENAGRLGEMKQLQNQI
NSLQLQLRSDFKDVDNKFHKEWVELQTRTLVTDDIDTYSKALDSAIMRYHGLKMEDINRI
IDELWKRTYSGTDIDTIKIRSDEVSSTVRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLA
SIIIRLALSETFGINCGVIALDEPTTNLDEENIESLAKSLNNIIHFRRHQKNFQLIVITH
DEKFLSHMGASQFADHFFKVRRDDRQKSQIEWVDINKVSEY
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatatataaactatcaatacaaggtataaggtcttttgactccaatgatagg
gagacaattgaatttggtacaccgttgaccttaattgtgggaaccaacggatcaggtaag
acaactattattgaatgtttgaaatatgctacaacgggtgacctgccacctaatagtaaa
ggtggagtattcgttcatgatcccaagattacaggcgaaaaagatatcagagcgcaggta
aaattggcttttactagtgccaacggcttaaatatgattgtcaccagaaatattcagtta
ctagcaaagaagactacgaacacttttaagactcttgaaggtcagttagtagctattagc
aggtctggaggccgtaccactttgagtacaagagcaacagagctcgatacacaggtgcct
ttgtatatgggtgttcctaaagctatcctagaatatgtcatattttgccatcaggaagac
agtctttggcctttgagtgaaccagcaaacttgaagaaaaagttcgatgagatctttcaa
gcgatgaagtttacgaaagctatagacaatttaaagatcataaagaaagatatggccgtc
gatataaaactattgaaacaatctgtggaacatttgaaagttgacagagatagatcaaaa
aacacgaaacgaagcttgcacaacttagaagccaaatatgctgagtaccaagaagacgtc
aaagcgattgaagtcaagttaaacgatataactagacgttctgatgaactcttcaaatca
aatcaagattttcaagaagtattatccaaatcagaaaacctgaaaactctcgaatcctta
acgtcaaatgaaattgaaagattatccagttccataaatgcaatcaacttggggaaatct
gaattacaagatctcttagataacttctcgaatacattgcatgagaaggaattagaagtt
caaaggtttgaagaggaattatttgcaatgaaagataaatccaaggaattccaaaacaat
tcaaatagtctagctaggcgacaaggtgaactagaagctgaattaaataagtatgcattg
aataaaacccgattaacagatttacagagtcaaatgtctacaagatatggtttcgaagtc
tcagtcgaagcatcaaatttcatcgaccagttaaaacactataaggaaaaattttgtagt
gaccttgatcgattcgaggaaactgaatcccagaagattaaagatcaagaagaaaagctg
tcaaaagttatctactcagatacagtacaggcgcagaagttagattattacaaagctgac
aagaacaaactgctcgatgagatatcaaatatggaatcagaaattataacttccgaatac
tcagaagatgatttagagaaggaaaagaaaatcttggctgaaactaccttgaagttagaa
gaatgggaaaagtcggatgtgataaagcaaatgggagctcagttgaaggagaagaacgaa
caaatattgcttgcagaaaacgatctcgaggaaattcaagataaaatcaagaaaacaaat
caacaagcagacctcttcgcaaaactaggtcttttgaagaagtcaattgcggaaaagtcc
caagctttggaaaatgcatctacatcactcgaaaacaactcaaaagcgaaaagctggaat
ctaatgtccaatgacgacctcgatatagattttaagaaaatttatatcaatttacagaag
cagatagcgttatcgaatagggaactgcatgaatgtgagaagaaatttacagaatcctca
tataatttgactacattacaaaatgacctcgttaccaaccaaaaaactgaaaatgatata
aaaagaaacctagaaaatgcgctcccagaggactgtccattaggcgaatatgacaaaatt
attgaggaggcggagttgtcctacagaacagccctggaaaatttgaaaatgcatcaaaca
actctcgatttcaataggaaggcgctagaagttgctgagtatgataattcttgttatctc
tgtttgagaagttttgatactgttgaattcaaaaatgagatattacagaatctaaaggca
aaaactgaagcgaagtttgagacagctttaaaggaagtagtaaaggaagagaaggaattt
ttggatagtttacggtccttggagaaagatttcaccttacttaactcatcatgggaaagg
attaataaaatcaaaattgactccaaaaaggctcaggaactaacaacatctttacgcgag
cagcttttgactatggaaaccaagaataatgagctaaaagaagaccaggttctagttgaa
aaggaactacgtgcctatgtggaaacaattattactttaaaaaaggagctaaaacaactc
gatgcggaatccagtcagatcttagagcaattgaagatttacggcagttctgatggtgaa
gtatttacagtggatgaattacagcaactacaaaagaataaaagtgaccatcttcgtggt
ctacgtaaagctataaatgaactgcaaatggcaagggaaggtaaaatacgagggcactct
gctttaatcaccacaataaagaaaaaaacaatggctattaatgagatggaaagatcttta
gtgcgtaaacaaaatacggaaaataatatgaagtctaaacgtaataggatcaaagaaata
gaatcaaaacttgggcagttgacttcagaggtcgatgaattacatagtcaaagaattttt
ttggagcaagaaacaaataatgtaaaagctgaatttaacagtaaaatgagttctaagaga
gatacactgaataagatcaataacgacataaacaccgtttctagtatttggaatgaaatt
acccagtatgacgaaagtttgctttctcaatgtacacgggagcttgaacgctctgaacta
gaattagctgaattaaatcagcaaattgacttcaagaataacgaactaaatgaccaaaaa
caaaaattaaaggattctaacaacgaaaaaagaaacctttcacaaaatatagagctacta
gatctgaaaaagaagctgaatgatatcaagagccaaattaacagtttggatattcaaaat
gcaaaagcgaagagagacaaatatcaacatgaatcatcgcaactaaggaatgagtacgag
aagttgagcgcagaaaatgcaggtagattaggagaaatgaaacaattacaaaatcaaatc
aattctttgcagttacaattacgctcggatttcaaggacgttgataataagtttcacaag
gaatgggttgagttgcaaactagaacactagtcacagacgatatcgacacgtactcgaag
gcacttgacagtgctatcatgagatatcatggtctcaaaatggaagatattaataggatc
atcgatgagttgtggaagcggacgtacagtgggactgatatcgatacgatcaaaatcagg
tctgatgaagtcagttctacagtaagaggcaagtcttataattatagggttgtaatgtat
aaacaagatgctgagttggatatgagaggcaggtgctctgccggacagaaagttcttgct
tccattataatcagactcgcattgtccgagacatttggtattaattgcggtgtcattgct
cttgatgaacccacaaccaatctagacgaagagaatatcgaatccctagcgaaatcatta
aataatataattcattttagaagacaccaaaaaaacttccagctgattgttattacccat
gatgagaaatttttgagccatatgggtgcatcacaatttgctgaccattttttcaaagtg
aggagagatgatagacaaaaatctcaaattgaatgggtcgatatcaataaagtaagtgag
tactaa
DBGET
integrated database retrieval system
