Kazachstania africana: KAFR_0D04620
Help
Entry
KAFR_0D04620 CDS
T02487
Symbol
KAFR0D04620
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
kaf
Kazachstania africana
Pathway
kaf03022
Basal transcription factors
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAFR_0D04620 (KAFR0D04620)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0D04620 (KAFR0D04620)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0D04620 (KAFR0D04620)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0D04620 (KAFR0D04620)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KAFR_0D04620 (KAFR0D04620)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KAFR_0D04620 (KAFR0D04620)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF5856
Motif
Other DBs
NCBI-GeneID:
13882434
NCBI-ProteinID:
XP_003957245
UniProt:
H2AUR0
LinkDB
All DBs
Position
4:907184..909043
Genome browser
AA seq
619 aa
AA seq
DB search
MSHSGAATFKKVAGIITINEDASPAELTWRSTSGDKTHTIVLDTIDKLQATPATSDKMIL
RLMSKVDESKKQKDNDGNEVLPKPQIFMFSFNNRTVMDNIKITLQQIISRYKDNEIYEEK
RRKESSEQPQSQQQQQHLSDVSLINTESLDDSLSEKKLRTNLKLQQSLLKSNKTLMKTFQ
ETVINSGLPPNEFWSTRVSLLRAFALSTSQKIGPYNVLSTIKPVASSENKVNVNLSKERI
LSIFQNYPIVKKAYSDNVPKNFKEQEFWARFFSSKLFRKLRGEKIMQNDRGDVIIDRYLT
LDQEYDRMDDEKLLHPVKKFIDIDGNVQDDPVRQGNKPDFTMQAGIDVNGNNDGTVDILK
GMNRLSEKMIMALENEYSRNSLQDQESPDTEEKESLEIMDLQNAFKAEYAMIHLKKKDMK
RTENTTAATSQKSSTLSITKAKASSEIANTINGLKGHFDLTKVTPDSQTNTEINQRVIAA
VKINAKQAKHNNLDPLLGGFIGNTNNSDATEASSDLPFELLESCRILHGTCCEFLKHFYI
HFQSAEYKQAVTVNKLYKHLKDCIDKLNELFNDVKTQDGEEMATMCVAYLKPVFDSISLA
VSKYDEAFLEQNKRDATPV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattcaggggcagccacattcaagaaagtagcaggtataattaccattaatgaa
gatgcttctcctgccgaattgacatggagatcaacatctggggataaaacacataccata
gtcctagatactatagataagttacaggcgactccagcaacaagtgataaaatgatttta
aggttgatgtcaaaagttgacgagtctaaaaagcaaaaagacaatgatgggaatgaagtt
ctaccgaaacctcaaatattcatgttttcattcaataatagaacagtaatggataacatc
aagattacattacaacagattatttctcgttataaagataatgaaatttatgaagagaaa
aggagaaaagaatcctctgaacaaccacagtcacaacaacagcagcagcatctatccgat
gtgagtctgatcaatactgagtcgctagatgattccctatctgagaaaaagttgaggaca
aatctaaaattgcaacagtctttactgaagtctaataagaccctaatgaaaacttttcaa
gaaactgtcatcaactctggcttaccgccaaatgaattttggtcaaccagagtttcatta
ttaagggcatttgcattatctacatcccagaagataggtccatacaatgtgttgtcgacc
atcaagcctgtagcatcatctgaaaataaagttaacgtcaatctttccaaagaaagaatt
ctaagtatatttcagaattatccaatcgtgaaaaaagcatatagcgataacgttcccaag
aactttaaagagcaagaattctgggccagatttttctcttcaaaattatttcgtaaacta
agaggtgagaaaattatgcaaaacgataggggtgatgttattattgacagatatctgacg
ctagatcaagagtatgatagaatggatgacgagaaattgcttcatcccgtgaaaaaattc
attgatatagatgggaatgttcaagatgatcctgtaaggcaggggaataaaccagatttc
acgatgcaagctggtatcgatgtaaatggtaataatgacggtacagttgatatcttgaaa
ggcatgaatagactgagtgaaaaaatgattatggcattagagaatgaatattctagaaat
agcctacaggatcaggaaagcccagatactgaagagaaagaaagtctagaaattatggat
ctacagaatgctttcaaggctgagtatgccatgatccatttgaaaaagaaagatatgaaa
agaactgaaaatacaactgcagcaacaagtcaaaaaagcagcacattgtccataaccaaa
gctaaggcttcatctgaaatcgctaacacaattaatggtttaaagggacatttcgatctg
acgaaggttactccagatagtcagactaacactgaaatcaatcaacgtgttatagcggct
gtgaagataaatgcaaagcaagcgaagcataataatttagatccactactgggagggttc
attgggaatacgaacaattctgatgccactgaagcttcttcagatttaccttttgaacta
ttagagagttgcagaatccttcatggtacgtgctgtgaatttttaaaacatttttatatt
cattttcaaagcgctgaatataaacaggctgttactgttaacaaactttacaaacattta
aaagattgcatcgataagctgaatgaattattcaacgatgtgaagacacaagacggtgag
gaaatggctacaatgtgtgtcgcatatttgaagcctgtgtttgattcgatttctcttgca
gtctcaaaatatgatgaagcattccttgaacaaaacaaaagagacgcgacgccggtataa
DBGET
integrated database retrieval system
