Kazachstania africana: KAFR_0E00390
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Entry
KAFR_0E00390 CDS
T02487
Symbol
KAFR0E00390
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0E00390 (KAFR0E00390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0E00390 (KAFR0E00390)
03041 Spliceosome [BR:
kaf03041
]
KAFR_0E00390 (KAFR0E00390)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0E00390 (KAFR0E00390)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
KAFR_0E00390 (KAFR0E00390)
Spliceosome [BR:
kaf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
KAFR_0E00390 (KAFR0E00390)
Complex B
KAFR_0E00390 (KAFR0E00390)
Complex C
U2 SnRNP specific factors
KAFR_0E00390 (KAFR0E00390)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
KAFR_0E00390 (KAFR0E00390)
TFTC complex
KAFR_0E00390 (KAFR0E00390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
WD40_WDHD1_1st
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
13882591
NCBI-ProteinID:
XP_003957328
UniProt:
H2AUZ3
LinkDB
All DBs
Position
5:complement(86916..90719)
Genome browser
AA seq
1267 aa
AA seq
DB search
MLVQESDIHLYHLTLQRQSNYTLSCTGHFVDLVETQVKQPRPLQLLLATETHVELYDIST
GSFSKIYQWPIFATLKTMQSFRPINSKFNFIAITSDAGNLTILHITKSHHSYKLTTLYNE
PITRSGIRRLAAIEYCQIDPRSRCLMISAIEKFKFAYLLNYNEVDSKLTISSPLEIIRSN
YITLSLVACASNFIDNPIFASLEIDSHKNSHLIFYMLDLSLNHIVKKSDYTLHPSANFLM
DLPDLAKYGISTNILGNDEQSINSFVIVGFNSYILIKDLNGYYNIKISIPKRENSTHNDS
NDHPVTIISGCLQTVKDGFFILLQTNVGDLFKLKVDPDENDRNRPTVSFTYFDTIPRSEQ
LHIFKNGYLFANCELHDNYLLQFESLGSDIQEINESFSPNLQSLENLAISDTQKNLNPLL
PNTINLNQSTPLVLTQKYANDDSIRHFSNSIDFEDFTSSDLPLNPQNLWTLKLNSSAFHE
LLVLSFQNSTMLLKVENDSIEDMKFPDSVPFILKNDKTIHVTILNNIYIIQVCHNQLVQV
STSDFKQVSSWFPPAGIHIIAASSTHKQLVVALSNNQVIYFEMPGEDSTLVESTKKLQLS
TRVLTLSLRLDVNKFSKNLIVATDDALIHIVSLDHEKSEDEFLEITSFQKLLGNVSSITY
IEDTIHLGLDNGVYIRSKFFGGNNDLISDVRTKYLGNKPVNLSILPRAYLRQNAEEETEE
DNEESGINDPEKESTSCVVIHSENTWVHYNYDNLEYIRPVSFSGDYKNLKRISEFTTTDI
KYNGCCALSNSGKLIIGRFKTFIFKNNWFRIDESKILRSDEVQEDDENGSTGDDEEEEEL
NQKFTMSNFINKTTLSFNGYTIFLENFKDTSEKQCRVSIMRAQFKEFLNNEGQSNSVYQT
LPNVNVSSATTLNFSDKTVHLILSTDKGTLLTFELSLKKENYKLLKMHETLIGEKVSTII
PFNNMLLVPLFGSLVLYSLGKKQLLKKSITKLIPSIRRVSTLANWENLRIAVGDNYESVT
VYEFDKQSNEFIPLADDTIKRSVTALAFLDELTVIGGDKYGNIWTLRLPEDTDPVNTEIN
SFRDLPKNIMECPFKLKLKNHFYVNDIPMSFHVIESLQRSDRVTVLYSGLQGTIGIFIPI
LSKNQIKTLKSLETSIDNLEMAMLDFRSDKKSRDDEDDYASVTEERALVSRDKANEVIEG
SYSTVGRDRFIYRSYYAPVKHVIDGDLCETFIDYSQIEQDLICQDIGKKFKPLDIIRMIN
EVRTNYI
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtacaggaatctgatatccatctataccatctcaccctacagagacaatccaac
tatacgctctcgtgtacgggacattttgtggacctggtagaaactcaagttaaacaacca
agacctctacagttgttactagctacggagacgcacgtagaactatacgatatatccact
ggttccttctccaagatttatcaatggcctatctttgccactttgaaaactatgcaatct
tttaggccaataaattcgaaatttaattttatcgccataacttcagatgctggtaattta
acaattttacatataacaaaatcacaccattcatacaaacttacgacactatacaatgaa
cctataaccagatccgggataaggagactcgcggctatagaatactgccaaatagaccca
agatctagatgtctaatgatttcagccattgaaaaattcaaatttgcatatcttttaaac
tataatgaagtcgattccaaattgacaatttcatcaccattagaaattattagatcaaat
tatataacgttatctctggtggcatgtgcttcaaattttatagataatccaatctttgca
tctttagaaattgattcccataaaaattcacatcttatattctatatgttagatttaagc
ctaaatcatatcgtgaaaaaatcagattatactttacatccatctgcaaatttcctcatg
gatttacctgatttagccaaatatggcatatctacaaatatcctcggtaatgatgagcaa
tcaataaattcattcgtcattgtcggtttcaatagttatatccttattaaagacctgaat
ggctattataacatcaagattagcattccaaaaagagaaaactcaactcataatgatagt
aatgaccatcccgtcaccatcatatcaggctgccttcaaactgtaaaagatggcttcttc
atccttttacagactaatgtaggtgatcttttcaaactaaaagttgatcccgatgaaaat
gatagaaatagaccaacagtatcatttacctatttcgataccatccccaggagtgaacaa
ctacatattttcaaaaatgggtatctttttgccaactgtgaacttcatgataactattta
ctacaatttgaaagcctgggatctgatattcaagagataaacgagtcattcagcccaaat
ttgcaatcattggaaaacctagcaatttctgacactcaaaaaaatttaaatccactttta
ccaaatacaataaatttaaaccaatccactcctcttgttttgactcaaaaatatgcaaat
gacgacagtattagacatttttccaattcaatagatttcgaagattttacatcgtcagat
ttaccacttaatccacaaaatctttggactttaaaattaaactcttccgcatttcatgaa
cttctggtcctatctttccaaaattcaacaatgctcctcaaagtggaaaatgattctatt
gaagatatgaaatttccagattcagtcccttttatcttgaaaaatgataagacaattcat
gtaacaatattaaacaatatctatatcattcaagtctgccataaccaacttgtccaagtt
tctacttctgatttcaagcaagtttcgtcgtggtttcctcccgctggtatacacatcata
gctgcatcatccactcataaacaattggtagtcgcactttccaataatcaagtgatctat
ttcgaaatgccaggtgaagatagcactcttgttgaatcaacaaaaaaattacaactatca
actcgcgtcctcactctttcgttaagattggacgtaaataaattcagcaaaaatctaatt
gtcgccacagatgatgcattaattcatatcgtgtcattagatcatgaaaagagtgaggat
gaatttttggaaatcacctcttttcaaaaattacttggtaacgttagtagtatcacctac
attgaagatactattcatttaggtttagataatggtgtttatattcgttctaaatttttc
ggtgggaataacgaccttatttcagatgtacgcaccaaatatcttggcaataagccagta
aacttatctattctgccaagagcatatttaagacagaatgctgaagaagaaactgaagaa
gacaacgaggaatcaggtatcaatgatccagaaaaagagtcaacgtcttgtgtggttata
cattcagaaaatacctgggtacattataactatgataacctggaatatatcaggcctgtt
tcttttagtggtgattataaaaacttgaaaaggatttcagaatttactacaacagatatc
aaatataatggatgctgtgctctctcaaactctggtaaacttatcattggtaggttcaag
acttttattttcaagaataattggttcagaattgacgaaagcaaaattttgaggagtgac
gaggttcaagaggatgacgaaaatggaagtactggcgatgacgaagaggaagaggaattg
aaccaaaaattcacaatgtcaaatttcataaacaaaacaactctatcttttaatggttac
actatatttctcgaaaatttcaaagatacaagcgaaaaacagtgcagagtgtccatcatg
cgggcacaatttaaagaattcctcaacaatgaaggtcagtcgaatagcgtataccaaaca
ctacccaatgttaatgtctcttcagcaacgacgctgaacttctccgataaaacagtccat
ttgattttatccactgataagggaactttactaacctttgaactatcattgaagaaagaa
aattataaattgttgaaaatgcatgagacccttattggcgagaaggtctcgactataatt
ccattcaacaatatgctattggtgccactctttggaagtctagttctttactcgttaggg
aaaaaacagcttctgaagaagtctatcacaaaattaataccctcgataaggagagttagt
accttagcgaactgggagaatttaagaattgcagttggtgataattatgaatcagttact
gtatatgaatttgataaacagtcgaatgagtttattcctctcgcagatgatactattaaa
agatcagttactgcactggcatttctagatgagctgacagttattggcggcgataaatat
gggaatatctggacgttaagactgcccgaagatacagacccagtaaatacggagataaac
agcttcagagatttacctaaaaatatcatggaatgccctttcaaactaaaattgaaaaat
cacttttacgtgaatgatatccctatgtcctttcatgttatagagtcattacaaagatcg
gacagagttacagttctttactcgggtttacagggcacaattggtatttttattccaatt
ctttccaaaaatcaaatcaagaccctcaaaagtttagaaacgtcgatagacaacttggaa
atggctatgctcgatttcagatccgataagaagtctagggacgatgaggacgattatgcc
agtgtaactgaggaaagagcgctcgtcagcagagacaaggcaaatgaggtcattgaaggg
tcatactcaacggtaggaagggatcgtttcatatacagaagttattatgcccctgtcaag
cacgttattgatggagatttgtgtgagactttcattgattactcacagatcgaacaggat
ctcatatgtcaggatattggtaaaaaattcaaacctttggatatcattcgaatgataaat
gaagttaggactaattatatataa
DBGET
integrated database retrieval system
