Kazachstania africana: KAFR_0E01230
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Entry
KAFR_0E01230 CDS
T02487
Symbol
KAFR0E01230
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
kaf
Kazachstania africana
Pathway
kaf03420
Nucleotide excision repair
kaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
KAFR_0E01230 (KAFR0E01230)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0E01230 (KAFR0E01230)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kaf04121
]
KAFR_0E01230 (KAFR0E01230)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0E01230 (KAFR0E01230)
Ubiquitin system [BR:
kaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
KAFR_0E01230 (KAFR0E01230)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
KAFR_0E01230 (KAFR0E01230)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_SCAP
DUF1513
Motif
Other DBs
NCBI-GeneID:
13882856
NCBI-ProteinID:
XP_003957412
UniProt:
H2AV77
LinkDB
All DBs
Position
5:complement(247314..248423)
Genome browser
AA seq
369 aa
AA seq
DB search
MNKQRLKRQIGLLQPTDLQGQVKISQFEKLIENLTLYHSTKYIKYYNHPYKINCLALNND
KTSFLAGNNNGTVSLWNLDNTLSTSHILNNKLARTSTKPHSHLFGINDMKWYSIDDGMFF
TCGNDKFVKLWDTNKFINVQDLEFNSNLFQMDTANQFILVTLDDYYPRLIDLRNMNLGIT
IFGKHLNSKTLCCKINPVRDNLIASSDNDGMIRIWDVRMNYRSIEEWKAHSRSINDMVWN
DNGTKLISTGVDGKIQIWREPFNETQGQLIGDINITRNRFLKRTSQRMIWLNDKYLIYNT
DLNEIHIYDTVENKFYNRIEFPRDINTNGQFMGMCLQDDLTNGMGIRLITGANVSSINND
SFILEYKLP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaaaggttgaagagacagatagggttgttacaacctacagacttacagggt
caagttaagatttctcaatttgaaaaactcattgagaatttaaccctgtatcattcgact
aagtacataaaatattacaatcatccgtacaagatcaattgtctggcactcaataacgac
aagacttcttttctagctgggaataataacggtactgtttcactatggaacctggataac
acactttcaacttcacatattttaaataacaaactagcgaggacatcgacaaaaccacat
tctcatctcttcgggataaacgacatgaaatggtactccatagatgatgggatgttcttc
acctgtggtaacgataagtttgtaaagctctgggatacgaacaagttcatcaatgtgcaa
gatttagaattcaattccaatttgtttcaaatggatacggcaaatcaattcattctcgtt
acactggatgattactacccgcggttgatagatttgaggaatatgaatctgggtataact
atttttggcaaacatttaaattccaagactctatgttgtaagattaatcccgtgagagat
aatctgattgccagttctgataacgatggaatgatcagaatctgggacgtaagaatgaac
tatagatctatcgaagagtggaaggcacactccagatctatcaacgatatggtttggaat
gataacggtacaaaattgatctcgacaggtgtagatggtaagatacaaatttggagagag
ccgttcaatgaaactcagggacagcttataggggatatcaatattacgaggaacagattt
ctcaagaggacctcccagagaatgatctggcttaatgacaaatatttgatttacaacacc
gatttaaacgaaatacatatctacgacacagtcgaaaacaagttctacaacagaattgag
ttcccccgagacattaacaccaatggccaattcatgggcatgtgcctccaagatgacctc
accaacggaatgggcatcaggctcatcaccggagccaacgtcagctccattaataacgac
agctttattctcgaatacaagctaccttga
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