KEGG   Kazachstania africana: KAFR_0E01230
Entry
KAFR_0E01230      CDS       T02487                                 
Symbol
KAFR0E01230
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
kaf  Kazachstania africana
Pathway
kaf03420  Nucleotide excision repair
kaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:kaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    KAFR_0E01230 (KAFR0E01230)
  09124 Replication and repair
   03420 Nucleotide excision repair
    KAFR_0E01230 (KAFR0E01230)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kaf04121]
    KAFR_0E01230 (KAFR0E01230)
   03400 DNA repair and recombination proteins [BR:kaf03400]
    KAFR_0E01230 (KAFR0E01230)
Ubiquitin system [BR:kaf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     KAFR_0E01230 (KAFR0E01230)
DNA repair and recombination proteins [BR:kaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      KAFR_0E01230 (KAFR0E01230)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 WD40_Prp19 Beta-prop_EML_2 Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 ANAPC4_WD40 PEP5_VPS11_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_SCAP DUF1513
Other DBs
NCBI-GeneID: 13882856
NCBI-ProteinID: XP_003957412
UniProt: H2AV77
LinkDB
Position
5:complement(247314..248423)
AA seq 369 aa
MNKQRLKRQIGLLQPTDLQGQVKISQFEKLIENLTLYHSTKYIKYYNHPYKINCLALNND
KTSFLAGNNNGTVSLWNLDNTLSTSHILNNKLARTSTKPHSHLFGINDMKWYSIDDGMFF
TCGNDKFVKLWDTNKFINVQDLEFNSNLFQMDTANQFILVTLDDYYPRLIDLRNMNLGIT
IFGKHLNSKTLCCKINPVRDNLIASSDNDGMIRIWDVRMNYRSIEEWKAHSRSINDMVWN
DNGTKLISTGVDGKIQIWREPFNETQGQLIGDINITRNRFLKRTSQRMIWLNDKYLIYNT
DLNEIHIYDTVENKFYNRIEFPRDINTNGQFMGMCLQDDLTNGMGIRLITGANVSSINND
SFILEYKLP
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaataagcaaaggttgaagagacagatagggttgttacaacctacagacttacagggt
caagttaagatttctcaatttgaaaaactcattgagaatttaaccctgtatcattcgact
aagtacataaaatattacaatcatccgtacaagatcaattgtctggcactcaataacgac
aagacttcttttctagctgggaataataacggtactgtttcactatggaacctggataac
acactttcaacttcacatattttaaataacaaactagcgaggacatcgacaaaaccacat
tctcatctcttcgggataaacgacatgaaatggtactccatagatgatgggatgttcttc
acctgtggtaacgataagtttgtaaagctctgggatacgaacaagttcatcaatgtgcaa
gatttagaattcaattccaatttgtttcaaatggatacggcaaatcaattcattctcgtt
acactggatgattactacccgcggttgatagatttgaggaatatgaatctgggtataact
atttttggcaaacatttaaattccaagactctatgttgtaagattaatcccgtgagagat
aatctgattgccagttctgataacgatggaatgatcagaatctgggacgtaagaatgaac
tatagatctatcgaagagtggaaggcacactccagatctatcaacgatatggtttggaat
gataacggtacaaaattgatctcgacaggtgtagatggtaagatacaaatttggagagag
ccgttcaatgaaactcagggacagcttataggggatatcaatattacgaggaacagattt
ctcaagaggacctcccagagaatgatctggcttaatgacaaatatttgatttacaacacc
gatttaaacgaaatacatatctacgacacagtcgaaaacaagttctacaacagaattgag
ttcccccgagacattaacaccaatggccaattcatgggcatgtgcctccaagatgacctc
accaacggaatgggcatcaggctcatcaccggagccaacgtcagctccattaataacgac
agctttattctcgaatacaagctaccttga

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