Kazachstania africana: KAFR_0E01390
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Entry
KAFR_0E01390 CDS
T02487
Symbol
KAFR0E01390
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
kaf
Kazachstania africana
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0E01390 (KAFR0E01390)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
KAFR_0E01390 (KAFR0E01390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
13882872
NCBI-ProteinID:
XP_003957428
UniProt:
H2AV93
LinkDB
All DBs
Position
5:277260..280913
Genome browser
AA seq
1217 aa
AA seq
DB search
MSNNANNNSKNQDSNGNFYVTTSGGNKNAPRQIHVAHRRTQSELTNLMIEQLTLQKQLEA
VQQQQQQLLYQQQQQYPSNTSYIPPNPHYGNQSIPGSSGSRSRTHSRNNSSYYHENTNNP
NNASSHRRTGSQSSVYGHSRRHSLGLNEAKKAAAEEQAKRIAGTETPTFLVPSINYNNQE
YSSPRSTSVDEQSSFKFPPPASSNNGNSPNYEHRYSSSNLSPSSFKFPASGNNNNNNNTN
MNTNKVNEFSSPGINSNWRTQQQQSPFRHRSSNSRDFANTLQQPAFFPGHKQRNSNSSVA
STNSNQNSNNNRKSLFAPYLPQANIPQLIEEGRLVAGILRVNKKNRSDAWVSTEGTLDAD
IYICGSKDRNRALEGDLVAVELLVVDDVWDSKKEKEEKKRRKDASTQHDLISLSSNDDYH
NDASATTSTTGKVVDDFKNSDDGFLSPTKPLGGGFMVKRKNSLKQRPTQKKNDDVEVEGQ
SLLLVEEEEINDQYKPLYAGHVVAVLDRIPGQLFSGTLGLLRPSQQQQQQQQSQLHSNDS
AVPQNKPKIAWFKPTDKKVPLIAIPTELAPKDFVENADKYADKLFVASIKRWPITSLHPF
GILVSELGEINDPNTEIDSILRDNNFLSNEYSDPRDPRREKSNLQAIPISSENYSKRRFF
TPERGYDDVLALTFNNSLSDFAIHIKEIDADRIELGCHVVDVTAHIEEGSSLDKRARKRS
TSVFMPQKTVDLLPQLLNEFLTLKPGNEAATISVVYTLDAETMKIKSTWIGETIISPSNI
MDVQEFDDDITAPSIRLVERIATAFYHERMGFDDINLLPSLSLFETLDDEKTKVDLNIMD
RSLGFLIINEIQRKVNATVAETLYSKLGDSSFLRRGAQPTVTKMATFEKKMKKLGYEVDV
SSSDTVLRSILAIKDDDARIGAEVLLFKTMSRAKYFVAGKADPDQYGHYALNLPIYAHFT
CPLRRYADHVVHRQLKSIINGIPYNEDIDSLKITAEYCNFKKDCSYQAQEQAIHLLLCKT
INDMGDKTGQILTMATVLQVYESSFDVIIPEFGIEKRVHGDQLPLIKAEFDGLNKVLELH
WQPGVDSATFIPADEKNPKSYRNSIKNKFKSTSEEIASLESSRLKDPAIFGEELSSELSK
LHLTEPKLRLPESLRKDAKGSVLDKFISTTVTRKENENCIQEIRELQKVPILLRAEIGMA
LPCLSVRALNPFMRRGA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaatgctaataataacagtaaaaatcaagattctaatggtaacttctatgtg
accacgtcaggaggtaataaaaatgcccctaggcagatccatgttgctcatagaagaacc
caaagtgaattaacaaacttgatgatcgaacaactgactttacagaaacaattggaggct
gtgcaacagcaacaacaacaattattatatcaacagcaacagcaatatccttccaataca
tcttatatcccacctaatccacactatgggaaccagtctattccaggctcttctggtagt
aggagtaggacacattcaagaaacaattccagttattatcacgaaaatactaataatccc
aacaatgcaagctcccatagaagaactggctcccagtctagtgtctatggccattctaga
agacattctttgggattgaatgaagcaaagaaggctgccgcagaagaacaagcaaagaga
attgccggaactgagacgccaaccttcttagtgccttcaattaattataataatcaagaa
tattcttctccacgtagtacatctgttgacgaacaatctagcttcaaatttccccctccc
gcttcctcaaataacggtaattctccgaattatgaacatcgttattcatcttcaaattta
tcaccttcttcattcaagttcccagctagtggcaacaacaataataacaataatactaat
atgaataccaataaagtcaatgaattctcatcacctggcattaattcaaattggagaacc
caacaacagcagtccccatttcgtcatagatcatcaaattctagagatttcgctaatact
ttacaacaacctgcattttttcctggacataaacaacgcaattcaaattcgtctgtggct
tcaactaattcaaaccaaaactcaaataacaatcgtaagtccctttttgctccttattta
ccacaagctaacataccacagctaatcgaggaaggtagattggttgcaggtatcttaaga
gttaataaaaagaatagatcagatgcatgggtttctacagaaggaacattagatgcagat
atttacatttgtggttcgaaggatcgtaacagagctctagaaggtgatcttgttgcagtt
gaattattagttgtcgatgacgtttgggattcaaaaaaagaaaaggaggaaaaaaagaga
agaaaagacgcttctacgcaacatgatttgattagtctttcatctaatgatgattatcat
aatgatgcctctgcaacaacatcgactactggtaaggtcgttgacgatttcaaaaattcc
gatgatggttttttatctccaactaagccacttggaggaggatttatggttaaaagaaaa
aactctttaaagcaacgtcctactcaaaagaaaaacgatgatgtggaagtggagggtcaa
tctctgttgctagttgaagaagaagaaattaatgatcagtataaacctttatacgccggt
catgtggttgctgttcttgatcgtatccctggtcaacttttcagtggtacattaggccta
ctaaggccatcgcagcagcagcagcagcaacaacaatcacagttgcattctaatgactca
gctgtccctcaaaataaacccaaaattgcatggttcaagcccactgataaaaaggtacct
ttaattgcaattcctactgaattggcacctaaagacttcgttgaaaatgctgataaatat
gctgataaactatttgttgcatctattaagcgttggcctatcacttcattgcatccattt
ggtattttggtatcagaattgggtgaaattaatgatccaaacacagaaatagattccatc
ttaagagacaataatttcttatctaatgaatattctgatccaagagatccaaggagagaa
aaatccaatttacaagctatacctatatcgagcgaaaactattccaaaagaagatttttc
acaccagagagaggttatgatgacgtcttagctttaactttcaacaattcactttctgat
tttgcaattcatattaaagaaattgatgccgatagaattgagttaggttgtcatgttgtg
gatgtcaccgcacatattgaggagggctcatcattagataagagagcaagaaagagatct
acaagtgtttttatgccacaaaagactgttgatttattacctcagttgttgaatgaattt
ttgacgttaaaacctggtaatgaggctgcaactatttctgttgtctatacgttggatgcc
gaaacaatgaaaattaagtcaacatggattggagaaacgattatatcaccatccaacatt
atggatgttcaagaatttgacgatgacataacggctccaagtattcgattggttgagcgt
attgcaacagcattttatcatgaaagaatgggtttcgatgatattaatcttttaccatca
ctttcattatttgaaactctcgacgatgaaaagacgaaggttgatttgaatattatggat
agaagcttaggttttttgattatcaacgaaattcaacgtaaggtgaatgctacagttgca
gaaactctttactctaaattgggagatagttcatttttaagaagaggagctcaacctaca
gtcaccaaaatggccacttttgagaagaaaatgaaaaaattaggctatgaagttgacgta
agctcaagtgatacagttttaagatcaattttagctataaaagatgacgatgctaggatc
ggtgctgaggtgcttttattcaaaacaatgtcaagagccaagtatttcgttgcaggtaaa
gctgatcctgaccaatatggtcattatgcgcttaacttacctatatatgcacatttcaca
tgtccattgagaagatatgcggatcacgtcgtccatagacaattgaagtctattataaat
ggaataccttataatgaagacatcgattcactaaaaattactgctgaatactgtaacttc
aagaaagattgttcgtaccaagcacaagaacaggctatccatttattattgtgcaagacc
atcaatgatatgggtgacaaaacaggccaaattttaactatggctactgttttgcaggta
tacgagtcttccttcgatgttattatcccagagtttggtattgagaagagagtacatggt
gatcagcttcctctaataaaagcagaatttgatggcctaaataaggtactagaattacat
tggcaaccgggtgttgatagcgcaactttcatcccggcagacgaaaagaatccaaaatct
tacaggaactcaataaaaaacaaattcaaatctacaagcgaggaaattgcaagtttagaa
tcgtctagattgaaggacccagctatttttggagaagaactaagttctgaattatctaaa
ctacatttgactgaaccaaaattaagattaccagaatcactaaggaaggatgccaaggga
agtgtcctagataaatttatttctacaactgtgacgagaaaggaaaatgaaaattgtatc
caagaaattcgtgaacttcaaaaagttcccatattacttagagcagaaattggaatggca
cttccatgcttatcagttcgtgcgctcaatccatttatgagaagaggggcctaa
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