Kazachstania africana: KAFR_0E01990
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Entry
KAFR_0E01990 CDS
T02487
Symbol
KAFR0E01990
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
kaf
Kazachstania africana
Pathway
kaf03018
RNA degradation
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0E01990 (KAFR0E01990)
09123 Folding, sorting and degradation
03018 RNA degradation
KAFR_0E01990 (KAFR0E01990)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0E01990 (KAFR0E01990)
03041 Spliceosome [BR:
kaf03041
]
KAFR_0E01990 (KAFR0E01990)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KAFR_0E01990 (KAFR0E01990)
mRNA degradation factors
5'-3' decay
Lsm complex
KAFR_0E01990 (KAFR0E01990)
Spliceosome [BR:
kaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
KAFR_0E01990 (KAFR0E01990)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
MAD
Motif
Other DBs
NCBI-GeneID:
13883010
NCBI-ProteinID:
XP_003957487
UniProt:
H2AVF2
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All DBs
Position
5:395511..395834
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AA seq
107 aa
AA seq
DB search
MSPLLKEYLNKKVVIVTTEGQCVIGTLEGFDKSTNLLLSSVYERFAKPEDITSQVQILRG
SEVVLCGLYDDKADLFGGTGGNVPSLKDTKNKVKDEHLIWFKVGRSK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgttgttgaaggagtatctgaataagaaagtcgttatagtgaccacagagggt
caatgtgtgattgggacgctggaaggattcgataagagtacgaatttgttgctttcgagt
gtatacgagagatttgccaagccagaggatataacatcacaggtgcagatacttcgaggc
agtgaagttgtcttgtgtggactatatgatgacaaagcagatctttttggtggcactggc
gggaatgtgccgtctttgaaagatacaaagaataaggttaaagatgagcatcttatatgg
ttcaaagtaggaagaagtaagtga
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