KEGG   Kazachstania africana: KAFR_0E01990
Entry
KAFR_0E01990      CDS       T02487                                 
Symbol
KAFR0E01990
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
kaf  Kazachstania africana
Pathway
kaf03018  RNA degradation
kaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KAFR_0E01990 (KAFR0E01990)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KAFR_0E01990 (KAFR0E01990)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kaf03019]
    KAFR_0E01990 (KAFR0E01990)
   03041 Spliceosome [BR:kaf03041]
    KAFR_0E01990 (KAFR0E01990)
Messenger RNA biogenesis [BR:kaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KAFR_0E01990 (KAFR0E01990)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     KAFR_0E01990 (KAFR0E01990)
Spliceosome [BR:kaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    KAFR_0E01990 (KAFR0E01990)
SSDB
Motif
Pfam: LSM MAD
Other DBs
NCBI-GeneID: 13883010
NCBI-ProteinID: XP_003957487
UniProt: H2AVF2
LinkDB
Position
5:395511..395834
AA seq 107 aa
MSPLLKEYLNKKVVIVTTEGQCVIGTLEGFDKSTNLLLSSVYERFAKPEDITSQVQILRG
SEVVLCGLYDDKADLFGGTGGNVPSLKDTKNKVKDEHLIWFKVGRSK
NT seq 324 nt   +upstreamnt  +downstreamnt
atgtcgccgttgttgaaggagtatctgaataagaaagtcgttatagtgaccacagagggt
caatgtgtgattgggacgctggaaggattcgataagagtacgaatttgttgctttcgagt
gtatacgagagatttgccaagccagaggatataacatcacaggtgcagatacttcgaggc
agtgaagttgtcttgtgtggactatatgatgacaaagcagatctttttggtggcactggc
gggaatgtgccgtctttgaaagatacaaagaataaggttaaagatgagcatcttatatgg
ttcaaagtaggaagaagtaagtga

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