Kazachstania africana: KAFR_0E02450
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Entry
KAFR_0E02450 CDS
T02487
Symbol
KAFR0E02450
Name
(RefSeq) hypothetical protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
kaf
Kazachstania africana
Pathway
kaf03020
RNA polymerase
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KAFR_0E02450 (KAFR0E02450)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0E02450 (KAFR0E02450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0E02450 (KAFR0E02450)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0E02450 (KAFR0E02450)
Enzymes [BR:
kaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KAFR_0E02450 (KAFR0E02450)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
KAFR_0E02450 (KAFR0E02450)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KAFR_0E02450 (KAFR0E02450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
13883056
NCBI-ProteinID:
XP_003957533
UniProt:
H2AVJ8
LinkDB
All DBs
Position
5:498762..502430
Genome browser
AA seq
1222 aa
AA seq
DB search
MSNEEYYEDDPYGFEDESAPITAEDSWAVISSFFREKGLVSQQLDSFNQFVDYTLQDIIS
EDSTLILEQLAQHTTEADNISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARLRNLTY
SSGLFVDVRKRTYEAVDVPGRDLKYELIAEESEDDSESGKVFIGRLPIMLRSKNCYLSDA
TESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEIRSAL
EKGSRFISTLQVKLYGRESSSSRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYD
VNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHI
TQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKL
TKDIFRYMQRTVEEANDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLN
RYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSC
ISVGTDPMPIITFLSEWGMEPLEDYIPHQSPDATRVFVNGVWHGVHRNPARLMETLRTLR
RKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDEALGHKELKVRKGHINKLMAT
EYQDIEGGFEDSEEYTWTSLLNEGLVEYIDAEEEETILIAMQPEDLEPMGEEEETQNDTA
MDPAKRIKATQNATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFL
TNFNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMN
QSSIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPHRTNTLRMKHGTYDKLDDDGLIAPG
VRVSGEDIIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIVDQVLITTNQDGLK
FVKVRVRTTKVPQIGDKFASRHGQKGTIGITYRREDMPFTADGIVPDLIINPHAIPSRMT
VAHLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYHSRGFEVMYNGHTGKKLM
AQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHG
AAAFLKERLMEASDAFRVHICGNCGLMSVIAKLSHNQFECKGCNNKIDIYQIHIPYAAKL
LFQELMAMNITPRLFTDRSRDF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaagaatattatgaggatgatccatatggatttgaagacgagagtgcccca
attacagcagaagattcctgggctgtaatctcttcctttttcagggaaaaaggtttagta
tcacaacaattggattcattcaaccaattcgttgattacactttacaagatatcatatca
gaagattcaacacttatattagaacaattagcacaacataccaccgaggctgataatatc
agtagaaaatatgagattagttttggtaaaatttatgttactaaaccaatggttaatgaa
tctgatggtgttactcatgctttatatccacaagaagctcgtttacgtaatctaacgtat
tcatctggtcttttcgtagatgtaaggaagagaacttacgaagccgttgacgttcctggt
agagacttaaaatatgaattaattgctgaagaatccgaagatgatagtgaaagtggtaaa
gtctttattggtcgtttaccaatcatgttaagatctaagaattgttacttaagtgatgct
accgaatctgatttatacaaattgaaagaatgtccatttgatatgggtggttatttcatt
attaatggttctgaaaaagttttaatcgctcaagaacgttctgcaggtaatattgtccaa
gttttcaagaaagctgcaccatctccaatatctcatgttgcagaaattagatctgcccta
gaaaaaggttcaagatttattagtactttacaagttaaattatatggtcgtgaaagtagt
tcatcccgtacaattaaggcgacacttccttatattaaacaagatattcctattgtcatt
atctttagagcccttggtattattccagatggtgaaatcttagaacatatttgttacgat
gtcaatgactggcaaatgttagaaatgttaaaaccttgtgttgaagatggtttcgttatt
caagatcgtgaaacagctttagattttattggtcgtcgtggtactgcattgggtattaaa
aaggaaaaaagaattcaatatgctaaagacattttacaaaaagaatttttacctcatatt
actcaattagaaggttttgaaagtagaaaagctttcttccttggttatatgattaataga
ttattgctttgtgcattagatcgtaaagatcaagatgatcgtgatcatttcggtaaaaag
agattagatcttgctggtcctctattaggtcaacttttcaaaactttattcagaaaatta
acaaaagatatattccgttatatgcaaagaacagtggaagaagccaatgatttcaatatg
aaattagctatcaatgctaaaacaatcacttctggtttgaagtatgctcttgctactggt
aattggggtgaacagaagaaagctatgtcttcaagagctggtgtctctcaagttttaaat
cgttatacttattcgtccacattatcacatttaagaagaactaatactcctattggtcgt
gacggtaaattggctaaaccacgtcaattacataatactcattggggtttagtttgtcct
gctgaaactcctgaaggtcaagcttgtggtttagttaagaacctttccttaatgtcttgt
atttctgtcggaacagatccaatgccgattattaccttcttaagtgaatggggtatggaa
cctctggaagattatatcccacatcaatctcctgatgctacaagagttttcgttaatggt
gtctggcatggtgttcacagaaatcctgctagattgatggaaactttaagaactttaaga
agaaaaggtgatattaaccctgaagtttctatgattagagatattcgtgaaaaggaattg
aagattttcactgatgctggtagagtttacagaccattatttattgttgaagatgatgaa
gctcttggacataaagaattgaaggttagaaaaggtcacatcaataaattaatggcaact
gaatatcaagatattgaaggtggttttgaagattcagaagaatatacttggacttctttg
ttaaatgaaggtttagttgagtatattgatgctgaagaagaagaaactatattaattgct
atgcaacctgaagatcttgaaccaatgggagaggaagaagaaactcaaaacgatactgca
atggacccagctaaacgtattaaggctactcaaaatgcaacaactttcacacattgtgaa
attcacccatcaatgattcttggtgttgctgcatctattattccattcccagatcacaac
caatctccacgtaatacttatcaatccgctatgggtaaacaagcaatgggtgtgttctta
acaaacttcaacgttcgtatggatacaatggcaaatattctgtactatcctcaaaaacca
ttaggcaccacccgtgctatggaatacctaaaattcagagaattacctgctggtcaaaat
gctatcgtagcaattgcatgttattctggttataaccaagaagattctatgattatgaat
caatcttcaattgatagaggtttattcagatctttattctttagatcatatatggatcaa
gaaaagaaatatggtatgtcgatcacagaaacctttgaaaaaccacatcgtacaaataca
ttaagaatgaaacatggaacttacgataaattagatgatgatggtctaatcgcacctggt
gtaagagtatctggtgaagatatcattataggtaaaaccactccaatttcaccagatgaa
gaagaattaggtcaaagaacagcataccattctaaacgtgatgcttctactccattgaga
agtactgaaaatggtatagttgatcaagtcttaattacaacaaatcaagatggtctaaaa
tttgttaaagttcgtgtcagaacgacaaaggttcctcaaattggtgacaagtttgcttcg
cgtcacggtcaaaaaggtactattggtattacttaccgtagagaagatatgccatttaca
gcggatggtattgtaccagatttaattataaaccctcatgctatcccatcacgtatgaca
gtggcacatttaattgaatgcttattgagtaaagtggctgccctttctggtaatgaaggt
gatgcttctccatttactgatattactgttgaaggtatatcgaaattattacgtgaacat
ggttatcactctcgtggttttgaagtcatgtacaatggacatacgggtaaaaaattaatg
gcacaaatattttttggtcctacctattaccaacgtttgagacatatggtagatgataag
atccatgcaagggctcgtggtccaatgcaagtcttaactagacaacctgttgagggtaga
tcaagagatggtggtttaagatttggtgaaatggaacgtgattgtatgattgcacatggt
gctgcagctttcttaaaggaaagattaatggaagcttcagatgcctttagagttcatatt
tgtggtaattgtggtttaatgtcagttattgctaaattaagtcataaccaatttgaatgt
aaaggttgtaacaacaagatcgacatttatcaaattcatattccatacgctgccaaattg
ctattccaagaactgatggcaatgaacattaccccacgtctatttactgatcgttctaga
gatttttag
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integrated database retrieval system