Kazachstania africana: KAFR_0E02660
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Entry
KAFR_0E02660 CDS
T02487
Symbol
KAFR0E02660
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
kaf
Kazachstania africana
Pathway
kaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KAFR_0E02660 (KAFR0E02660)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0E02660 (KAFR0E02660)
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0E02660 (KAFR0E02660)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KAFR_0E02660 (KAFR0E02660)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
KAFR_0E02660 (KAFR0E02660)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pfc11_Rna14-15-ID
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
VHS
zf_UBZ
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
13883155
NCBI-ProteinID:
XP_003957553
UniProt:
H2AVL8
LinkDB
All DBs
Position
5:complement(543537..545327)
Genome browser
AA seq
596 aa
AA seq
DB search
MDPEAERIVKDFTSILEELTFNSRPIITTITKIAEENISYSQYFVDALENRIDKCVPGQK
LYAFYAVDSICKNAGSPYTIYFSRNLFSLYKKTYLLVDNNTRSKLINMFKTWMTPNEATG
GPLFEGAALERIEKFLIKASALHQKNFQLKLPTPTVPLLLRDIDKLTVLTNERLRNLPND
EKLLMKLNVLSQLKQSLQREKLSQDALRQVQLQLKQIFAQDQKVIQDSVRRQQQQNEQGE
SKQSSKDHTMENGSKETGSYNNNVHSESSTPFSPLFSSSSGSTPPVSSTLFGNISSFLPA
QNFAEIERSNKISSLNKLYESLNEEGLLYEPPKESVVTLYNKLNKDSELSSINDTVKNLP
PISTLQNILFDCKAYFSTVNINVSNIPSLQFNQQNIANKNPLVTNSLINLLYRVKSNKCS
TCGKRFGNAPEEKKLYNEHLDWHFRINNRIKGSSVSSTSASLAAAANKNIQSRNWYLSAL
EWINFKDDFIVSTKEVVDEDRQTNSQNNRAGIVTLPSGGKISSATGSNVSEESLYNKFVA
VPESSVDMTFKCPICKDVVSSVYDEESGEWIWKNTVSIDGKYFHATCYHETSKNSR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacccagaagcagagcgtatagtgaaagattttaccagtattcttgaagaattgaca
ttcaattcaagaccaatcatcaccactataacaaagattgctgaagaaaatatatcgtat
tcacagtatttcgttgatgctctggaaaatagaatcgataaatgtgtccctggtcagaaa
ttatacgcattttacgcagtggattccatttgtaaaaatgctggttctccatatacaatc
tattttagtagaaatttgtttagtttatataaaaagacttatttgctagtggacaacaat
acaagaagtaaactgattaatatgttcaagacttggatgactcctaatgaagctacaggt
ggtcccttatttgaaggagctgcactagaaagaatagaaaagtttttaataaaggcaagt
gcattacatcaaaagaattttcaattaaaattaccaactccaacggttccattattattg
agagatattgataagttaactgtccttaccaatgaaagactaagaaatctaccaaatgat
gagaagttacttatgaaattgaatgtgttatcacaattaaaacaaagtttacagagagaa
aaactttcacaggatgctttaaggcaggtacaattacaattgaaacaaatttttgctcaa
gatcagaaagttatacaggattctgtcagaagacagcagcaacagaatgaacaaggtgaa
tcaaagcaatctagtaaagatcatactatggaaaatggcagtaaggaaacaggaagctac
aataataatgtacattcggaaagttccacaccttttagtcctctttttagtagttcttct
ggtagtactccgcctgtgtcatctacactttttggtaatatatcaagctttttacctgca
caaaattttgctgaaattgaaagatcgaataaaatatcaagtttgaataaactttatgaa
tcattgaatgaagaaggacttctttatgagccaccaaaggaatccgtagtcacactctat
aacaaattaaacaaagattctgagttgtcgagtatcaacgatactgttaagaatttacct
ccaatttcaacgttacaaaatattttgttcgattgtaaagcatatttctccacagtaaat
attaacgtttcaaatattccgtcattacaatttaatcagcagaatattgctaataagaat
cccttggtcactaatagtttgattaacctactgtatagggtcaaatcaaataagtgtagc
acctgtggaaagagatttggtaatgctccagaagagaaaaaactatacaatgaacattta
gactggcatttcagaatcaataatagaataaaaggatcctccgtctcttccacctcagca
agtttagcggcagcagccaataaaaatattcaatcaagaaattggtacctaagtgcttta
gagtggattaatttcaaagatgattttatagtgtctaccaaagaggttgttgacgaggac
agacaaactaacagtcaaaataatagagctggcatagttacattgccatcaggaggtaaa
atttcctctgcaacaggatctaacgtcagtgaagaatccttatataacaaattcgtcgcg
gttcctgaatcaagtgtcgatatgacatttaaatgtccaatatgtaaagatgtggtcagc
agcgtttatgatgaagaatctggagagtggatttggaaaaatacagtatcgatagatggg
aaatattttcatgctacatgttatcatgaaacatctaaaaatagtaggtaa
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