Kazachstania africana: KAFR_0E03180
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Entry
KAFR_0E03180 CDS
T02487
Symbol
KAFR0E03180
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
kaf
Kazachstania africana
Pathway
kaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAFR_0E03180 (KAFR0E03180)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0E03180 (KAFR0E03180)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0E03180 (KAFR0E03180)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
KAFR_0E03180 (KAFR0E03180)
Coactivators
SAGA/TFTC/STAGA complex
KAFR_0E03180 (KAFR0E03180)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
KAFR_0E03180 (KAFR0E03180)
STAGA complex
KAFR_0E03180 (KAFR0E03180)
TFTC complex
KAFR_0E03180 (KAFR0E03180)
SAGA complex
KAFR_0E03180 (KAFR0E03180)
SLIK complex
KAFR_0E03180 (KAFR0E03180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
LisH
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_like
Beta-prop_HPS5
Beta-prop_VPS8
TFIIA
Beta-prop_SPT8
RMC1_N
Beta-prop_DCAF12
EPL1
Motif
Other DBs
NCBI-GeneID:
13883207
NCBI-ProteinID:
XP_003957605
UniProt:
H2AVS0
LinkDB
All DBs
Position
5:637055..639499
Genome browser
AA seq
814 aa
AA seq
DB search
MAQPNQNKNNKNQQQQQQQQQQQQQQQQQQQRQSSNSAQQANNGNASQQQSRPSSQFSAQ
DLNRIVLEYLNKKGYHRTEAMLRAESSRTITPQNKKSPGTTKNGKLPEPSTTPPVSDKTV
KPVSNPILPPQQQPGVKRDNEGSVIMSSEQQVINSMSPGNYIRAYSLLKNWIDESLEIYK
PELSYIIYPIFIYLFLNLISKDAIVARRFFDKFSSDYKILHGTDINRLYSINSVDHIKEN
ETANAFISGKYRITISKTILNLLLYFLNENENVGGSLILSMINKHLQPVIVNSPVTAKDR
LADGLKIESSTNDNNNANVNLEINSIPVKLGPLPKDEEFVKEVETELKIKDDQEKQQQDN
NDANTKTLLQEYKSIQNDTASDAATVTDKNEDDKDKSDNLIKETKEEVLEENKNIIKTPV
ESKAFMVSPSIDTLPLPLKTSLDLKLEIQKVKESRDAIRLDNIQTSLPSVCMYTFHNTNK
DMSCLEFSDDCRLAATGFQDSFIKIWSLDGSSLVTNKLPSYKKEEILTTGDETSSLLIGH
SGAVYSTSFSPDNKFLLSGSEDKTVRLWSMDTHTTLVSYKGHNHPVWDVKFSPMGHYFAT
ASHDQTARLWSCDHIYPLRIFAGHLNDVETVSFHPNGCYVFTGSADKTCRMWDISTGDSV
RLFLGHTAPVLTTAVTPDGRWLCTGGEDGVINVWDIGTGKRLKQMRGHGKNAIHSFSFNK
EGNILISGGADHSVRVWDLKKATPEPSAEPEQPFAGYVGDVTASVNQDIKEFGRRRAIVP
TSDLVASFFTKKTPVFNVKFTRTNLALAGGAFRD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccgaatcagaataaaaataacaaaaatcaacaacaacaacaacaacaacaa
caacaacaacagcagcagcagcaacaacaacaacgacagagctcgaatagcgcacaacaa
gcaaataatggcaatgcttcacaacagcagagtagaccctccagtcagttctctgcgcag
gatcttaacagaattgtcttggagtatttgaataaaaaaggttaccatcggacagaggca
atgttaagggcagaaagtagtcgtaccattacaccgcaaaataagaaatctccaggaacc
acaaagaatggcaagctgccggaaccttctacgactcctcccgtatcagataagactgtg
aagcccgtcagtaatcccattttaccaccacaacagcaacccggtgtcaagagagacaat
gaaggctctgtaataatgtcaagtgaacaacaggtgatcaattccatgtctcctggaaat
tatattagagcatattcattactgaagaattggatcgatgaatcattagaaatttataaa
ccagaattaagctatattatttacccaatattcatctacctttttttaaatctaattagc
aaagatgccattgtcgcaagaaggtttttcgataagttttccagtgattataaaatcttg
catggtacagatattaatagactttatagtatcaattcagttgatcatataaaggaaaat
gaaactgcaaatgcattcatctcgggtaaatatagaatcaccatttcaaagacaatattg
aatcttctactttattttttaaatgaaaatgaaaatgtcggtggatcgctcatcctaagt
atgataaataaacatttacaaccagttatagtgaattccccagtgactgcaaaagataga
ctagcagacggtttaaaaatcgaatcttccactaatgataacaataatgccaatgtaaat
ctagaaattaattctattcctgtaaaattaggtcctttgccaaaagatgaagaatttgta
aaggaagttgaaaccgaattgaaaattaaagatgatcaagagaaacagcaacaagataac
aatgatgcaaacacaaagactcttcttcaagaatataaatcgatacaaaatgacactgct
tctgatgcagctactgtaacagataaaaatgaagacgataaagataaaagtgacaatttg
ataaaagaaactaaagaggaagttcttgaagaaaataaaaatataataaaaacacctgtt
gaatctaaagcattcatggtctctccatccattgacacacttcctttaccattaaagaca
tcactagatttaaaattagaaattcaaaaggtaaaagagtctcgtgacgcgatcaggttg
gataatatacaaacttcattaccaagtgtttgtatgtatactttccacaatacaaacaag
gatatgtcctgtttggaatttagtgatgactgtagattggctgctactgggtttcaagat
agctttattaaaatttggtcattagatggttcatcacttgtgaccaataaattaccaagt
tataagaaagaagaaattctcactacaggtgatgaaacatcatcattacttatcggtcat
agcggagccgtgtactctacaagcttcagtccagacaataagtttctattatcaggatct
gaagataaaactgttagattatggtcaatggatactcatacaactttggttagctacaaa
ggtcacaatcatcctgtatgggatgtgaagttttcaccaatgggtcattattttgcaact
gcatcacatgatcaaacagcaagattgtggtcatgcgatcacatttatccactacgtatc
tttgcagggcatttaaacgatgtcgaaacagtttcattccatccaaatggttgttacgtt
ttcactggttcagctgataaaacttgtagaatgtgggatataagcacgggtgattctgtc
agactatttttgggtcacactgcgcctgttttaacaacagctgtaacgccagatggcaga
tggctatgtacgggtggcgaagatggtgtcattaatgtttgggatataggaactggtaaa
agattaaagcaaatgcgtggacatggtaagaacgctattcattcattttcatttaacaaa
gaaggcaacattttgatcagtggcggtgccgatcattctgtgagggtttgggacctcaag
aaagctactcctgaaccaagtgcagagccggaacagccttttgcaggctatgttggagat
gttaccgcttctgttaaccaagatatcaaagaatttggtcgtaggcgcgcgattgtccca
acaagtgatcttgtagcctcattctttaccaagaagacacctgttttcaacgttaaattc
accaggactaacctagcactagcgggtggtgcttttagagattga
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integrated database retrieval system
