Kazachstania africana: KAFR_0E03350
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Entry
KAFR_0E03350 CDS
T02487
Symbol
KAFR0E03350
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0E03350 (KAFR0E03350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0E03350 (KAFR0E03350)
03041 Spliceosome [BR:
kaf03041
]
KAFR_0E03350 (KAFR0E03350)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
KAFR_0E03350 (KAFR0E03350)
Spliceosome [BR:
kaf03041
]
Complex B
Other components
Prp19-related factors
KAFR_0E03350 (KAFR0E03350)
Complex C
KAFR_0E03350 (KAFR0E03350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_8
UTP6_C
Lig_C
Motif
Other DBs
NCBI-GeneID:
13883224
NCBI-ProteinID:
XP_003957622
UniProt:
H2AVT7
LinkDB
All DBs
Position
5:complement(667358..669835)
Genome browser
AA seq
825 aa
AA seq
DB search
MEYINGYIIDDDDIAFEYELQSTPQNMLTWKRYIETWKNQVKGDKRSVRHVFWLYERFCN
QFHQDPEVWQEYIQWVIDTGKMHYLKIDAMYRRAFESCKRNCDTLCLQYMKFATGQFDLT
LIRKALVTSLQKIAKENQFKIWYSVLEFVNKCLLPLMEETLVDDEEDQCEQFRVLLRHSL
SDDKDSNKNIVKNAWLSQLYERYLTVCPPEKLSGVLMHLGRTNNYEIIKQLYDKFLFKSN
EGNDIRPSETTPFSLCLLYLNALEGMKLELQYEIFFEEVLKLHNRALVQLLIVLVKHYIK
SSQINKIEPLLNNIISSTTLFHEFASIYNICIDFEEATLATIMDIYEDNPSKDIPDLESE
IQKHMNTLTVLSSSYEMKLNDFYLRKNVNNVQYWLERIELQDSLEAKLEVFQDAILRVDP
VKVTVPKVFGKLWCSYAEIYWDSKYYDTSREIYEMALKVPFPFIEDLELIWATWTRNELR
IFGIERAIFLLRTALKLPKSPENLIEKFKKGKGKVPSQTVIFNSLQLWTLFIDLAEVQCS
TISFADEKLVAELINTYEKAIALKIVTPIMFVQYAQLLQKVGKIRESFQIYERAISSFPS
VVQYELWTLYLQQACITENDLSKEHIRDLFDQATALTEDEIDCRPIFILYNEFEERNEGV
TKRSLDILLEGARKISDKFVKSKIQMWDLCIMKATSSSRTELLRAIYAECIQVLPRREVS
RYVIDFAQFEVSLGETTRPREILTYGASLVAPALNKELWDYREQFELQFGDKEKYKNMLV
LKQRLEVSMKIDTEEATKQKGNIEFVMSKKQIQHSSNPEEIELDI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggaatatattaacgggtacattatcgatgatgatgacatagcgtttgagtatgagtta
caaagtactccccaaaatatgctgacttggaaaaggtatattgaaacatggaagaaccag
gttaagggagataagagatcggtgcgccatgttttttggttatatgagaggttttgcaat
caatttcatcaggatcctgaagtttggcaagagtatattcaatgggtaattgatacggga
aaaatgcattatttgaaaattgatgctatgtatcgcagagcttttgaaagttgcaaaagg
aactgtgacactttatgtctacagtatatgaagtttgctacggggcaatttgacttgact
ctcatacgaaaggccctggtaacatcattacaaaaaatagcgaaagaaaatcagttcaaa
atatggtattctgtactagaatttgtcaacaaatgtctccttccattaatggaggaaaca
ttggtggacgatgaagaagatcagtgcgagcaattccgagtgctccttcgccactctctt
tctgatgacaaagatagcaataaaaatatagtaaaaaatgcatggctttcgcaactatat
gaaaggtatctaactgtctgcccacctgaaaaattaagtggcgtactaatgcacttaggt
aggacaaacaactatgagataatcaaacaactttatgataagtttcttttcaaaagtaac
gaaggaaatgacattagaccttcagaaacaacacccttttccttgtgtcttctttattta
aatgccttagagggtatgaaattggaattacaatacgaaatatttttcgaggaggtgttg
aaacttcataatagagccttagtacaattattgattgttttagtgaaacattatatcaaa
tcctctcaaattaataaaattgagcccttattaaataacattatttcatcaacaacatta
tttcatgaatttgcatccatttataatatctgcattgattttgaagaggctacgttagct
actataatggatatctatgaggacaatccatctaaggatattcctgatctagagtctgaa
atacagaagcatatgaatactcttacagttttatctagttcatacgaaatgaaactcaat
gatttctatttgagaaagaacgtgaataatgttcaatactggctagagaggattgagtta
caagacagtcttgaagccaaacttgaagttttccaagatgctatactaagagtcgatccc
gttaaagtgacagtaccaaaggtttttggaaaactttggtgctcttacgcagaaatttac
tgggatagtaagtactacgacactagtagggaaatttatgaaatggcattaaaagtccct
tttccctttattgaagatctggagcttatatgggctacttggacgagaaatgaattacgc
atatttggaattgaaagagccatctttttactcaggacagccttgaagttacccaaatct
ccagaaaatttgattgaaaaattcaaaaaaggaaaaggtaaggttccctcccagacggtg
atctttaattctttacagttgtggacattatttatcgatcttgcagaagtacaatgctct
actatttctttcgcagacgaaaaactggttgctgaacttatcaacacttacgagaaggca
attgcattgaaaatagtaactccaattatgtttgtccaatatgcacaattgttgcaaaaa
gtcggtaaaataagggaaagtttccagatatatgagcgtgcaatctctagcttcccaagt
gttgtccagtatgaactttggacgctgtatctacagcaagcttgtataacggaaaacgat
ctgtctaaggaacatatacgggacttgtttgatcaagcgactgcattaactgaggacgaa
atagactgcaggccaatttttatactttataacgaattcgaagaaagaaatgagggagtt
accaagagaagtcttgacattctcttggaaggtgcacgcaagataagtgacaaatttgtt
aaaagtaagattcaaatgtgggatctctgtatcatgaaggcaacatcatcttcgagaacg
gaactacttcgagctatatatgccgagtgcatacaagtgttgccgagaagagaggtatcc
agatacgtgattgatttcgcccaattcgaagtatctttgggggaaactacgcgtcctagg
gaaattttgacatatggtgcttctttagtagcacctgctcttaacaaagaactatgggac
tacagggagcaatttgaactacaatttggtgataaagaaaaatacaagaatatgctagtt
ctcaaacagaggcttgaggtttcgatgaagattgatactgaggaagctaccaaacaaaag
ggtaacattgagtttgtaatgtccaagaaacaaattcaacactcatcaaatcctgaagaa
attgaacttgacatataa
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