Kazachstania africana: KAFR_0E03500
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Entry
KAFR_0E03500 CDS
T02487
Symbol
KAFR0E03500
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
kaf
Kazachstania africana
Pathway
kaf03020
RNA polymerase
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KAFR_0E03500 (KAFR0E03500)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0E03500 (KAFR0E03500)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0E03500 (KAFR0E03500)
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0E03500 (KAFR0E03500)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0E03500 (KAFR0E03500)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
KAFR_0E03500 (KAFR0E03500)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KAFR_0E03500 (KAFR0E03500)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KAFR_0E03500 (KAFR0E03500)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
MSSS
Motif
Other DBs
NCBI-GeneID:
13883317
NCBI-ProteinID:
XP_003957636
UniProt:
H2AVV1
LinkDB
All DBs
Position
5:707752..708267
Genome browser
AA seq
171 aa
AA seq
DB search
MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLQEVEGSCTGKFGYILCVLNYDQIEIERGR
ILPTDGSAEFKVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT
FNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcattaaagatctctcgctaaatattacgttgcatccatcgttttttggacct
cgaatgaagcaatatctgaaaacaaaattgctacaagaagtggaaggttcatgtacaggt
aaatttggatatattctatgtgttttgaattacgatcagattgagattgaacgtggtaga
atattgccaactgatggttccgcagaattcaaagtcaaatacagagcggtcgtattcaaa
ccattcaaaggtgaagttgtagatggtaccgtcgtatcgtgctctcaacatggtttcgag
gttcaagttggcccaatgaaagtctttgttaccaagcacttaatgccacaggatttgacg
tttaatgctggttcaaatccaccttcttaccaaagttcggaagacgttatcacaataaag
agtagaattagagtgaaaattgaaggttgtataagtcaagttagttctattcatgccatt
ggtagtattaaggaagattatctgggtgctatttag
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