KEGG   Kazachstania africana: KAFR_0E03720
Entry
KAFR_0E03720      CDS       T02487                                 
Symbol
KAFR0E03720
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
kaf  Kazachstania africana
Pathway
kaf03013  Nucleocytoplasmic transport
kaf03015  mRNA surveillance pathway
kaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KAFR_0E03720 (KAFR0E03720)
  09122 Translation
   03013 Nucleocytoplasmic transport
    KAFR_0E03720 (KAFR0E03720)
   03015 mRNA surveillance pathway
    KAFR_0E03720 (KAFR0E03720)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kaf03019]
    KAFR_0E03720 (KAFR0E03720)
   03041 Spliceosome [BR:kaf03041]
    KAFR_0E03720 (KAFR0E03720)
Messenger RNA biogenesis [BR:kaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     KAFR_0E03720 (KAFR0E03720)
    TREX complex
     KAFR_0E03720 (KAFR0E03720)
Spliceosome [BR:kaf03041]
 Complex C
  Other components
   EJC/TREX
    KAFR_0E03720 (KAFR0E03720)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    KAFR_0E03720 (KAFR0E03720)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_11 RRM_PARP14_3 RRM_3
Other DBs
NCBI-GeneID: 13883339
NCBI-ProteinID: XP_003957658
UniProt: H2AVX3
LinkDB
Position
5:complement(join(744915..745358,746003..746269))
AA seq 236 aa
MSANLNKSLDEIIGTRPKRATRGARAAAPRRATKQVNHRRSQPVNRQRTSRGPANAVSRV
ARMLNSSASSLTKVNVEGLPRDIKQDAVREFFSSQVGGVQSVLLSYNERGQSTGMANITF
RNSESAKVAVNKFNGAPIDGGRSKLRLNLIVDPTQSRQDLSQRIKPLPTRGQNQGPQRGN
RPAAPVRGPNRKAALAKKKTQRPKKEKPAKKSLEDLDKEMADYFGDSSNAAAATGN
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtccgctaacttaaacaagtcactagatgaaatcattggtaccagaccaaagagagcc
acccgtggagctcgtgccgctgctccaagaagagctaccaagcaggtcaaccaccgtcgt
tcgcaaccagtcaacagacaaagaacctctagaggtccagcaaatgccgtttcaagggtt
gctagaatgctaaactcatctgctagctctttgacaaaagttaacgttgaaggtctacca
agagacatcaaacaggacgctgttagagaatttttttcttcccaagtcggtggtgtccaa
agtgtcctattgagttacaacgaaagaggtcaatccactggtatggctaatataacattc
agaaacagtgaatctgcaaaggtcgccgttaacaagtttaatggtgctccaattgatggt
ggcagatctaaattaagattgaatttgattgttgatccaactcaatctcgtcaagattta
tcacagagaatcaaaccattaccaaccagaggccaaaatcaaggcccgcaaagaggtaac
agaccagctgctccagttagaggtccaaacagaaaagctgctttagctaagaagaagact
caacgtccaaagaaagagaagcctgccaagaaaagtttagaggatttagacaaagaaatg
gccgactatttcggtgatagcagtaatgccgctgctgccacaggtaactaa

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