Kazachstania africana: KAFR_0F00870
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Entry
KAFR_0F00870 CDS
T02487
Symbol
KAFR0F00870
Name
(RefSeq) hypothetical protein
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0F00870 (KAFR0F00870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0F00870 (KAFR0F00870)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KAFR_0F00870 (KAFR0F00870)
Spliceosome [BR:
kaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
KAFR_0F00870 (KAFR0F00870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
HA2_C
nSTAND3
T2SSE
Flavi_DEAD
NB-ARC
AAA_30
ResIII
ABC_tran
Cas3-like_C_2
PhoH
Motif
Other DBs
NCBI-GeneID:
13884152
NCBI-ProteinID:
XP_003957819
UniProt:
H2AWD4
LinkDB
All DBs
Position
6:162308..165034
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AA seq
908 aa
AA seq
DB search
MEGDLSSGIGKRRVRRRYEDEPAIQEVEKESSSGYVSHDDGGLETTNRQPVRNVSRYEGS
PDYKESHGHPSIHDRIGQSRYGGKVLTKEAAEAQKYQRLIRDIRHLEQRVSRTSWESLSR
NDQDELGLKRDLLKLYEQRQSESRKSALAAQGSLDANKNDAPRRGKQFENTEQKTRQQVW
EERQLGNAVSRQDTDEIVIPESENYDYVFDEKAMIDFTSDNEDLYSETEEVEEEVFPEEQ
KLLDSLEKEENRILSVKESRKLLPVYQYRDKLMKAVKENQVLIVVGETGSGKTTQLPQYL
FEDGYTQGNKFQIAVTQPRRVAATSVATRVSDEMNVVLGKEVGYSIRFDDKTTPNKTIIK
YMTDGMLLREFLTDSKLSAYSCIMIDEAHERTLATDILLGLLKGVLDQRKELRILISSAT
MNAKRFSEFFNNCPIFNIPGRRFPVDIHYTLQPEGNYISAAITTVFQIHTTQALKGDILV
FLTGQEEIETTKEKIEQISAKLGSRIPQLIVTPIYANLPNEQQLAIFQKTPDNCRKVVLA
TNIAETSLTIDGIKYVIDSGYVKENSYVPSTGMTQLVTVACSKASTDQRAGRAGRVGPGK
CFRLFTKWSYENELEQMPKAEILRTNLSNTVLLLLSLDVTDLLNFPFMDKPSISALTKSL
ESLYILGALDSKGKITELGKMMCEFPCEPEFAKVLHTAATHKKCIGVLQECLSIVAMLHE
TTSIFAGNKKEAVAAITSDIGSDHLLYLEIYNQWRDSNYSRTWCLDHKIQFKTMCRVRNV
RDQLFKCCKKLKLTNIHESTSTANDNDVISRITCAFISGFPMNIVQLENAGYKTIGKSKG
GISVNLHPSSVVFQNYKVNAQKPDKFILYQQLILTSKEFIRGCLPILQENWLVEMVPHMF
GHLSRDKL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgatctgtcgagtggcatagggaagaggagagtcagaagaaggtatgaagat
gagcctgctattcaggaagtggaaaaagagagtagttcaggatatgtttcccatgatgat
ggtggtctagaaacaacaaataggcagcctgttagaaacgtatctcgttatgaagggtca
ccagactataaggaatcacatggccaccctagcatacatgatagaataggccagagccgg
tacggtggcaaagtgttgaccaaagaggcggccgaagctcaaaaatatcaaaggctaatt
agggatattcgtcacttggaacaaagagtatcaaggactagttgggaaagtctttcccgt
aatgaccaggatgaacttggtttgaaaagagatcttctaaagttgtatgagcaaagacag
tctgaatcaagaaaaagtgcgctcgctgctcaaggaagcctggatgcgaataagaatgat
gcgccaaggcgtggtaaacaatttgaaaacactgagcaaaagaccagacagcaagtctgg
gaggagcgacaactgggaaatgcagtttcgaggcaggatacagatgaaatcgtaatacca
gaatctgaaaattatgactatgtgtttgatgaaaaagccatgattgattttacaagtgat
aatgaagatttatactcagaaactgaagaagttgaagaagaagtctttccagaggaacaa
aagttattggactctttagaaaaggaggagaaccgtattttgtctgtaaaagaatcgagg
aaattattacccgtttatcaatacagagataagctaatgaaagctgtgaaggaaaaccaa
gtcttgattgttgttggtgagacaggttccggtaaaactacacagttgcctcaatatctt
tttgaggatggttacactcaaggtaacaaatttcaaattgccgttacgcaaccacgtaga
gttgcagcaacctctgttgcgacaagagtttctgatgaaatgaatgttgtgctcggtaaa
gaggtgggttacagcattagattcgacgataaaactacgccaaataagacaattatcaag
tatatgacagatggtatgcttcttcgggaatttttgaccgattctaagttatcagcatac
tcttgtattatgattgatgaagcacatgaacgtacactagctacagatattttattaggt
ctattaaagggtgttttggatcaaagaaaagagctaaggatactcatttcatcagctaca
atgaacgccaaaagattttcggagttttttaataattgtcctattttcaatattcctggt
agaagattccctgtagatattcactacactttgcaaccagaaggtaattacattagcgct
gctattacaacagtatttcagatccataccacacaagctttgaagggagatatattggtc
ttcttaactggtcaagaagagatcgaaaccacgaaggaaaagattgagcaaatatctgca
aaattaggctcacgaatacctcagctaattgtgacacccatttatgcaaatttgccaaat
gagcagcagctagcaatttttcaaaagacaccagacaattgccgtaaagttgttctagct
actaatatagcggaaacctccttaactattgatggtatcaagtatgtcattgatagtggt
tacgtaaaggaaaattcgtatgtcccttctactggtatgacgcagctagtgactgttgca
tgttcaaaagcatctacggatcaaagagcaggtagagcgggtcgtgtagggcctggtaag
tgttttagattgtttaccaaatggtcttatgaaaatgaattagagcaaatgcccaaagca
gagatattgaggacaaatttatcaaatactgtgctattgttactctcactggatgttaca
gaccttctaaattttccatttatggataaaccaagtatttctgccttaaccaaatcattg
gaaagtctgtatattctaggtgctcttgatagtaaaggtaagatcactgaacttggtaag
atgatgtgtgaatttccatgtgaaccagaatttgcaaaagtattgcataccgcagcaact
cataagaaatgcattggtgttttacaagaatgcttaagcatagtagcaatgttgcatgaa
acaacctctatatttgcaggtaataagaaagaggctgtcgcagcgataactagtgacata
ggaagtgatcacttactatatttagagatttacaaccaatggagagattccaattattca
agaacctggtgcctggatcacaaaatccagttcaagacaatgtgtagggtaagaaatgta
cgtgatcagttgttcaagtgttgtaagaagctcaagctaactaatattcatgaatctacg
tcgactgctaacgataacgatgtcatcagtaggattacttgtgcttttataagtggcttt
ccaatgaatatagttcagttagaaaatgcaggatataagacaatcggaaaaagtaagggt
ggtataagtgttaacctccatccttcaagcgttgttttccaaaattacaaagtgaatgca
caaaaacctgataaattcattctgtatcagcaattgattctgacctcaaaagaatttatc
aggggctgtttacctatattgcaagaaaattggttagtggaaatggttccacatatgttt
ggacatttgtctagagacaaattgtaa
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