Kazachstania africana: KAFR_0F04290
Help
Entry
KAFR_0F04290 CDS
T02487
Symbol
KAFR0F04290
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
kaf
Kazachstania africana
Pathway
kaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAFR_0F04290 (KAFR0F04290)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0F04290 (KAFR0F04290)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KAFR_0F04290 (KAFR0F04290)
mRNA degradation factors
5'-3' decay
Decapping complex
KAFR_0F04290 (KAFR0F04290)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
13884491
NCBI-ProteinID:
XP_003958159
UniProt:
H2AXC4
LinkDB
All DBs
Position
6:841786..844350
Genome browser
AA seq
854 aa
AA seq
DB search
MSFFGFDASLPNSEKVNSKKKKPLDFDETYKGLGDYELEENDYLNNETFGANVELGTDFD
FGHGDSTPVSNPDVPHRSYVAAASTGMNVPQENLDTTIDLKPMESLWGGSGHNNQQVMQQ
PIQPAEPQILSMEEIERQQRQLQMNPSMQQQGGYVMPPPGFMQQQGPPGNMNNQFPNQFP
PQFVPPGMPNQPQFQQIPQDFHQQMYQPPNQQFHPQQMNVPPFQHPQAIEQQQQQQPRPN
IQSPQEIQPNQAIQQQPNEAMKSPSVEQEAMKSSVQQQHLQSRLSPQQHRPRTSSMSRQQ
HQQQRREPPSAEEQKRLQIRHAKVEKILKHSGLMTPRDKDFITRYQLSQIVTEDPYNEDF
YFQVYKIIQRGGVVGESNKGLIARAYLEHSGHRLGGRYKRADIALQRMQSQVEKAVTVAK
ERPHKNALEINDLDKNSEHGRDGVLGKISSTLNSKAPRRQLQIPLKSANSNDNSTSSLGS
PIQGNNMMNAATSGALEEVTESLGNVDINAKSRVRRRSSYAFTSVDQNSVLSRSGGRKFV
LRLIETVYGEVLELEANLRSGKKIDNNKLWDALHIDDEAYEVCPFVSMLSFDKGVKIMPR
IFNFLNKEQKLKLLQIFFSELSHLNIIIISSYKTNPTPSESQLKQIDLFQTVFLKIIVSF
LSNNSNFIEIMGLLLHLIKNNNVSFISTSKIGLNLITVLISRAALIRQDSNRSNILSSPE
ISTWNEIYDKLFTSLESKLSLIFPPKEYTNKIISITNDPQFLQDDTELNLCYYDQAYIWQ
FLASLALSGKLNHQRIIIDEVRDEIFGTITLAESLKSVNSNDSTYRREKLYQDLNLFLNV
MGLVSRDGEITELK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttggttttgacgcatctttgccaaacagtgaaaaggtcaattcaaaaaaa
aaaaagcctttagattttgatgaaacttataaaggtttaggtgattatgaacttgaagaa
aatgattatttgaataatgagacctttggtgccaatgtagaattaggtacggacttcgat
tttggtcatggtgattcaacccctgtttctaatccagacgttccacatagatcttatgtc
gctgctgcatctactggtatgaatgttccacaggaaaatttagacaccactatagatttg
aaaccaatggaatcattatggggtggtagcggtcacaataatcaacaagtaatgcaacaa
ccaattcaaccagcggagcctcaaattttatcaatggaagaaattgaaagacaacaacgt
caattacaaatgaacccttcaatgcaacaacaaggcggttacgtaatgcctccaccgggt
tttatgcaacaacaaggccccccaggaaacatgaacaaccagttccccaaccaattccca
cctcaatttgttccacctggaatgccaaatcaacctcaattccaacaaatccctcaagat
ttccaccaacaaatgtaccaaccaccaaaccaacaattccatccacagcagatgaatgtg
ccaccatttcaacatcctcaagcaattgaacaacaacagcaacaacaacctcgcccaaat
attcaatcaccacaggagattcaaccaaatcaagctatccagcaacaaccaaatgaagct
atgaaatctccatctgttgaacaagaagctatgaaatcatctgttcaacaacaacattta
caatctcgtctatctccacaacaacatcgtcctcgcactagctcaatgtctagacaacaa
caccaacaacaaagaagagaaccaccatctgcggaagaacaaaaaagattgcaaattcgt
catgctaaggttgaaaaaattttgaagcattctggcttgatgactcctcgtgataaagat
ttcattacacgttatcaattatcccaaattgttacagaagatccatacaatgaggatttt
tactttcaagtttacaagattatccaacgtggtggtgttgttggtgaatctaataaaggc
ttgattgcacgtgcctatttggagcattctggtcacagacttggtgggagatacaaacgt
gctgacatagctttacaaagaatgcaaagtcaagttgaaaaagctgttacggttgctaaa
gagagaccacacaaaaatgctcttgaaattaatgatctagataaaaattcagaacatggt
cgtgatggtgttttaggtaaaatctcttctactttgaatagtaaggcaccacgtagacaa
ttgcagattcctttaaaatctgctaattctaatgataactcaacttcttctcttggttct
ccaattcaaggaaataacatgatgaatgctgcaacttctggtgccttggaagaagttact
gaatccttaggtaatgtggacatcaacgcaaagtccagagtaagaagaagatcttcttat
gcatttacttctgtggatcaaaactctgttctttctagatcgggtggtagaaagtttgtg
ttaagattaatcgaaactgtttatggagaagttttagaacttgaagccaatctaagaagt
ggtaagaagattgataataataaattatgggatgctttacatattgacgatgaggcttac
gaagtttgtccatttgtgtcaatgctatctttcgataaaggtgtcaaaattatgccaaga
attttcaatttcttaaacaaggagcaaaaattgaaattattgcagattttcttttcagaa
ttatcacatctgaatattatcattatcagttcttacaagactaacccaacaccttctgaa
tcacaattgaagcaaattgatttattccaaaccgttttcttaaagattatcgtttcattt
ttatcaaataattcgaactttattgaaatcatgggtttgttattgcatctaataaagaat
aataatgtttcattcatttctacgtcaaaaattggtttgaatttaattaccgtattaata
tctcgtgcagctcttattagacaggattctaatagaagtaatattttatcatctcctgaa
atctctacgtggaatgaaatttatgataaattgtttacttcattggaaagcaaattatca
ttgattttcccaccaaaggaatatactaataagataattagcattaccaacgatccgcaa
tttttacaagatgataccgaattgaatctatgttattatgatcaggcctacatatggcaa
ttcttggcttcattggctttaagtggtaaactaaatcatcaacgtatcataattgatgaa
gtcagggatgaaatctttggtacaataactttagcagaaagtttaaagagtgtcaacagt
aacgactcaacatatagacgtgaaaagctttatcaagatttgaatttgttcttgaacgtt
atgggattagtctctagagatggcgagatcactgaattgaaatga
DBGET
integrated database retrieval system
