Kazachstania africana: KAFR_0G00940
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Entry
KAFR_0G00940 CDS
T02487
Symbol
KAFR0G00940
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
kaf
Kazachstania africana
Pathway
kaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KAFR_0G00940 (KAFR0G00940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0G00940 (KAFR0G00940)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
KAFR_0G00940 (KAFR0G00940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
13884618
NCBI-ProteinID:
XP_003958262
UniProt:
H2AXM7
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All DBs
Position
7:218658..219494
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AA seq
278 aa
AA seq
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MESSDEDDDRFLYGSDEEEVQRVVVQPTTVRDSDTIHDTNDSDVISESESDSDIEFIISN
GPDPTRLDSQSISLSTETISVATESVKTALQTSEDGSSVTPSATTTTATNVTTAGTLPTD
QSQQDEVNTAGNIDLDKDGLFDGQPITQIDPEVLKEKPWRQPGANLADYFNYGFNEFSWM
EYLDRQEKIKTEYNPRRILMGLLTLQQQGKLDPKPINKPLNDSTPNPVIVNTNKSPPAMP
PPGFPPLPMFGGFPPFPMPGMIPPMNQQQQQQQKPNQN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaagtgatgaagatgatgataggttcctctatggttcagatgaagaggaagtt
cagagagtagtagtacaaccaacgacggtacgcgatagcgataccattcatgatacaaat
gattctgatgtcatttctgaatctgaatccgattcagatattgaatttatcatcagtaat
ggtccagatccaactagattggattcccaaagtatatccctgtccacagaaactataagt
gtcgctacagaaagtgtaaagactgcattacagacaagtgaagatgggtcctctgtaact
cccagcgcaactactacaacagccaccaatgtaacaacagctggtacactccccactgat
caaagtcaacaggatgaagtaaatactgcaggaaatatcgacttggataaggacggtctc
tttgatggtcaaccaataactcaaatcgatccagaagtactcaaagaaaaaccttggaga
cagccaggtgctaatttggctgattatttcaattacgggttcaatgagtttagttggatg
gaatatctagatagacaagaaaagattaaaactgaatataatccaagaagaatattgatg
ggtttactcactttacagcaacagggtaaactggatccaaaaccaataaataaacctctt
aatgactctactccaaatcctgtaatagtaaacacaaataaaagtcctccagctatgcct
cctccaggatttccaccattaccaatgttcggtgggttcccacctttcccaatgcccggt
atgattcctccaatgaaccaacaacaacagcaacaacaaaaaccaaatcaaaattaa
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