Kazachstania africana: KAFR_0G02030
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Entry
KAFR_0G02030 CDS
T02487
Symbol
KAFR0G02030
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
kaf
Kazachstania africana
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0G02030 (KAFR0G02030)
03041 Spliceosome [BR:
kaf03041
]
KAFR_0G02030 (KAFR0G02030)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0G02030 (KAFR0G02030)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAFR_0G02030 (KAFR0G02030)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
KAFR_0G02030 (KAFR0G02030)
mRNA cycle factors
Common to processing body (P body) and stress granule
KAFR_0G02030 (KAFR0G02030)
Spliceosome [BR:
kaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
KAFR_0G02030 (KAFR0G02030)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
KAFR_0G02030 (KAFR0G02030)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
13887217
NCBI-ProteinID:
XP_003958372
UniProt:
H2AXY7
LinkDB
All DBs
Position
7:complement(428516..430336)
Genome browser
AA seq
606 aa
AA seq
DB search
MAEVTQQFNNLNIDENGGYVPPHLRNGSRPRRNNNNNNNTGSNEGGFFGFNRSRGGFNNR
GKYNNYNNNNGGYRQQRSNFDGRWVDGKHVPGARNERVELQLFGTPEDPSFQSSGINFDN
YDDIPIDASGTDVPEAITEFTAPTLEGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMA
CAQTGSGKTGGFLFPVLSESFKNGPTPLPENSGSHYQRKAYPTAVIMAPTRELVSQIFDE
AKKFTYRSWVKPCVVYGGAPIANQMREMDRGCDLLVATPGRLSDLLERGKISLANVKYLV
LDEADRMLDMGFEPQIRHIVEGCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSV
GRVGSTSENITQRVLYVEDEDKKSALLDLLAASDEGLTLIFVETKRLADQLTDFLIMQNF
RATAIHGDRTQSERERALAAFRSGAANLLVATAVAARGLDIPNVTHVINFDLPSDIDDYV
HRIGRTGRAGNTGVATAFFNGDNSNVVRGLVEILEEANQEVPQFLHDAVRDSGRGRGGRS
GFGSRNNSNRDYRKQGGGFSRSRDNSRGFSRSNSAKSSSNWGSSASAGSSRSTNNGWGNS
SSSSWW
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttacccaacaattcaacaacttgaatattgatgaaaatggtggttacgtc
ccacctcatttaagaaatggttcaagaccgagaagaaacaacaacaataataataacacc
ggcagcaatgaaggtggcttttttggcttcaacagaagcagaggtggtttcaacaacaga
ggaaaatataataactacaataataacaatggaggttaccgtcaacaaagaagtaatttt
gatggtagatgggtcgatggtaaacatgtcccaggtgctagaaacgaaagagtcgagtta
caattattcggtacacctgaagatccaagtttccaatcctctggtatcaatttcgataat
tatgatgatattccaatcgatgcatctggtactgacgtcccagaagctatcacagaattc
actgctccaactttagaaggtttattactagaaaacattaaattagctcgtttcactaaa
ccaactccagtacaaaaatactccgttccaatcgttgccaacggtagagatttaatggct
tgtgcccaaactggttctggtaagactggtggtttcttgttccctgttctttctgaatct
ttcaagaatggtccaacaccacttcctgaaaattctggtagtcactaccaaagaaaagca
tacccaacagctgttatcatggcgccaacaagagaattagtctctcaaatctttgatgaa
gcaaagaaattcacttatagatcctgggttaagccttgtgtcgtttacggtggtgctcca
attgctaatcaaatgcgtgaaatggatcgcggttgtgatcttttagtcgccaccccaggt
cgtttaagtgacttattagaacgtggtaaaatttctctagctaacgtcaagtacttagtc
ttggatgaagccgatagaatgttagatatgggtttcgaaccacaaattagacatattgtt
gaaggttgtgacatgaccccagtaggggaaagacaaactcttatgttctccgccactttc
ccagcagatattcaacatttagctcgtgatttcttatcagactacatcttcttatctgtc
ggtagagtcggttccacatcagaaaatattacccaaagagtcctctatgtcgaagatgaa
gacaagaaatccgctttattagatttattagccgcttctgacgaaggtttaactttaata
ttcgtcgagaccaagagattagctgatcaattgactgatttcttaatcatgcaaaatttt
agagctaccgctattcacggtgaccgtacacaaagtgaacgtgaaagagcattagctgct
ttcagatctggtgctgccaacttgttggtcgccaccgccgtcgctgctagaggtttagat
atccctaacgtcactcacgtcatcaacttcgacttaccaagtgatatcgatgactatgtc
cacagaattggtagaactggtcgtgctggtaacactggtgtcgctactgctttctttaac
ggagataactctaacgtcgtcagaggtttagtcgaaattttggaagaagctaaccaagag
gtcccacaattcttacatgacgctgtaagagacagtggcagaggtagaggtggtagaagc
ggttttggtagccgtaacaacagtaacagagattaccgtaagcaaggtggtggtttctca
agaagtagagacaactccagaggtttctcaagatctaacagtgccaaatcatcttctaac
tggggttcttccgcttccgcaggatctagtagatcaacaaacaacggctggggtaacagt
tcttctagttcatggtggtaa
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