Kazachstania africana: KAFR_0G02760
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Entry
KAFR_0G02760 CDS
T02487
Symbol
KAFR0G02760
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0G02760 (KAFR0G02760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0G02760 (KAFR0G02760)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KAFR_0G02760 (KAFR0G02760)
Spliceosome [BR:
kaf03041
]
Complex C
Other components
Step II factors
KAFR_0G02760 (KAFR0G02760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
AAA_30
ABC_tran
T2SSE
SRP54
Sigma54_activ_2
AAA_16
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
13887405
NCBI-ProteinID:
XP_003958442
UniProt:
H2AY57
LinkDB
All DBs
Position
7:571389..574763
Genome browser
AA seq
1124 aa
AA seq
DB search
MNAEITKLIGTDDLTIIEFLKDIREKTRNLADFKGQVLSLEVGFDEDTINRLYDLLSGDH
DSPFNILDFLKNVLQITNSEDVKIISDFIIDLLSTTTSWNDFRDKMVGIDSGIPEAALLE
LYSQMKGDIKTEETVAEVIVKMEENEAHGLSLPNENIEWSKLDDPSDVLPKLPMRQLDHS
PQMNKVYKGRIKRVMTFGCFVEIFGTELKKCDGLMHISEMSKRRISDPYDIVVEDQDVYV
KVIKLHPNGKISLSMKNVDQITGKDNNLEIMSEINGRQGRQKQANSKLIRNRRLTSPERW
EIRQLISSGAASIEDYPELTEETEQKKDNVDNNETENLDVELNKDDAPRFLGGEMNELSD
QYEAQKVSKVPKGSMNRSAMYGSNLLREHRENKMKKRKDIENEIRKKRNLEDPTVNKDKS
REEIEFLKTQLVVTAWERKRMKEKVSFGKRTNLPMMEQRRSLPIYQMRSELVKAVKENQF
LVIVGETGSGKTTQITQYLDEEGLSGKGIIGCTQPRRVAAVSVAKRVADEMGVKVGSDVG
YTIRFEDQTSPKTRIKYMTDGMLQREALLDPMMSKYSVIMLDEAHERTIATDVLFALLKE
AGKKRPDLKVIITSATLDSAKFSKYFLDCPIINIPGKTFPVEVMYSTTPTMDYIEAALDC
VMNIHINNDPGDILVFLTGQEEIDSCCEILFERVKTLGDTIGNLLILPIYSALPSEIQSK
IFEPTPKDTRKVVLATNIAETSVTIDGIYYVVDPGFSKVNSYNSRAGMEQLVVTSISQAQ
ANQRKGRAGRTGPGKCYRLYTESAFYNEMSRNSVPEIQRQNLSHTILMLKAMGINDLINF
EFMDPPPKSLMVSALNDLYNLEALDNDGYLTKLGQRMSQFPMDPTLAKTLVASVSNECSE
EITIIVSMLSVQNVFYRPKGKQQEADLKKVNFHHPYGDHLTLLNVFKAWERNNYSERFCE
LNFLHYRHLKKANDVRKQISQLLQKFGLPVTSCHGDPDVIRKTLVSGFFMNASKRDSQVG
YRTIRGNNVVGIHPSSSLHGKEFEYVIYHSLVLTAKEYMSQVTSIEPGWLIEMAPHFYKE
IGSDSQSRKRLKIQPLYNKFSKDQNSWRLSSIRQTREKALGVKR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgaaattactaagcttattggaacagatgatttgactattattgaatttttg
aaagatatcagagaaaagacgagaaatttagctgatttcaagggccaagtattgagtctc
gaggttggctttgacgaggacactataaacagattatatgatcttttatcaggcgatcat
gatagtccattcaatatactagattttttaaagaatgttttgcagattaccaatagtgag
gatgtcaaaattataagtgattttattattgacctcttgagcaccacaacatcttggaat
gatttcagggacaagatggttgggatagatagtggaatccccgaagcagctttattagag
ctttattcccaaatgaaaggtgatataaaaacggaggagacagtggctgaggtaatagta
aaaatggaagagaatgaggcccatggtctatcactgccgaatgaaaatattgaatggagt
aagctggatgacccgagtgatgttctaccgaagcttccaatgaggcagctggatcactct
cctcaaatgaataaagtgtataaaggaagaataaaaagagtgatgacatttggttgtttc
gtagaaatctttggaacagaactgaaaaaatgcgatggtttaatgcatatttcggagatg
tcaaaaagaagaataagtgatccatacgatattgttgttgaggatcaggatgtttatgtg
aaagttataaaactacaccctaacggcaaaatttcactaagtatgaaaaatgtcgatcaa
ataacgggtaaagataataaccttgaaataatgtctgaaataaatggtaggcaaggtcga
cagaaacaggctaattcaaaactcataaggaatagaagattaacgtcaccagaaagatgg
gaaatcagacagttaatatcaagcggagctgcttccattgaggactatccagagttaaca
gaagaaacagaacaaaagaaagataatgtggataataatgagacggagaatttagatgta
gagctaaataaggatgatgcaccaaggtttttgggaggcgaaatgaacgaactctctgac
caatatgaggctcaaaaggtttctaaagttccaaaaggctccatgaatagatctgctatg
tatggctcgaacttactaagggagcacagagaaaataaaatgaaaaagaggaaagatata
gagaatgagatcaggaaaaagagaaatcttgaagatcccacagtcaataaggataagagc
agagaagaaattgaattcttaaaaactcagctagtggttactgcgtgggagagaaaaagg
atgaaggaaaaagtatcatttggcaaaaggaccaatttacccatgatggagcagaggaga
tccctgccaatttatcaaatgagatctgaattagtcaaagctgtgaaagaaaaccaattt
cttgttattgttggtgaaacgggctctggtaagacgactcaaataacacaatatttagac
gaagaaggattaagcggcaagggtattattggttgtacacaaccgcgaagggttgccgcc
gtatctgttgcaaaaagagtcgctgatgagatgggtgtcaaagttggtagcgacgtaggt
tatactattcgttttgaggatcaaacttcaccaaaaacaagaataaagtatatgacagat
ggtatgttacagagggaggcattattggatcctatgatgtcgaaatactctgtaattatg
ttggatgaggcacacgaacgtacaattgctacggatgttcttttcgctctcttaaaagaa
gcaggaaagaagagacctgatctgaaagtcattataacctccgctacactcgattctgca
aaattttctaagtattttttagactgccctatcattaatataccaggtaagacatttccc
gttgaagtgatgtactcaacaactccaactatggattatattgaagcagcattagattgc
gttatgaatattcatattaataatgatcctggtgatatactggtgtttttaacaggtcaa
gaagagatcgattcatgttgcgagatcttgtttgaaagggttaaaacattgggcgataca
attggcaacctactgatattacctatctattccgcattaccaagtgagattcaatcaaaa
atttttgagcccaccccaaaggatactcggaaagtagtgttagctacaaatattgccgaa
acatccgttacaattgatggaatatactatgttgtagatcctggattttccaaggtgaat
agttacaattcgagagcaggaatggagcaattagtcgttacatcaatatctcaagcacaa
gcaaaccagagaaaaggtagagcaggtagaactggccccggaaagtgctataggctttac
actgaatctgcattctataacgaaatgtcacgaaatagtgtacctgagatccagaggcag
aatttatcccacacgattttaatgttaaaagctatgggcataaatgacttgataaatttt
gaatttatggatccacctccgaagtccctgatggtatctgcattaaatgatctctacaat
ttggaggccttagataatgatggatatttaacgaagctaggccaaagaatgtctcaattt
cctatggatcccacattggcgaaaacattagtagcatcggtttcgaacgaatgttcagag
gagattacgataatagtatcaatgttgtcagttcaaaacgtgttttacagaccaaaaggc
aagcaacaggaagcagatttgaagaaggtaaattttcatcatccgtatggcgaccattta
acgctcctaaatgtattcaaggcttgggaacgaaacaattactctgaaaggttctgtgaa
ttgaattttttacactatagacatttaaaaaaggcaaatgatgtaagaaaacaaataagt
caattattgcagaaattcgggttacctgttacaagctgccacggagaccctgatgtaata
agaaaaacattagtaagtggtttcttcatgaatgcatcgaaaagagactcacaagttggc
tataggaccataagaggaaataatgttgttggtattcatccttcaagctcattgcacggt
aaagaattcgaatatgtgatatatcacagtttggtacttactgcgaaggaatatatgtca
caagtgacttctattgaaccgggctggttaatagagatggcaccacatttctataaggag
attggttcagatagtcaatcacgcaagagactcaagattcaacctctttacaataaattt
tcgaaagatcaaaattcatggaggttgagttcaataagacaaacaagagaaaaagcgctt
ggtgtcaaaagataa
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integrated database retrieval system
