Kazachstania africana: KAFR_0H01090
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Entry
KAFR_0H01090 CDS
T02487
Symbol
KAFR0H01090
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
kaf
Kazachstania africana
Pathway
kaf03030
DNA replication
kaf03410
Base excision repair
kaf03420
Nucleotide excision repair
kaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KAFR_0H01090 (KAFR0H01090)
03410 Base excision repair
KAFR_0H01090 (KAFR0H01090)
03420 Nucleotide excision repair
KAFR_0H01090 (KAFR0H01090)
03430 Mismatch repair
KAFR_0H01090 (KAFR0H01090)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kaf03032
]
KAFR_0H01090 (KAFR0H01090)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0H01090 (KAFR0H01090)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0H01090 (KAFR0H01090)
DNA replication proteins [BR:
kaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
KAFR_0H01090 (KAFR0H01090)
DNA Replication Termination Factors
ELG1-RFC complex
KAFR_0H01090 (KAFR0H01090)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
KAFR_0H01090 (KAFR0H01090)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
KAFR_0H01090 (KAFR0H01090)
Check point factors
HRAD17(Rad24)-RFC complex
KAFR_0H01090 (KAFR0H01090)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
DNAX_ATPase_lid
AAA_22
AAA_16
AAA_33
Motif
Other DBs
NCBI-GeneID:
13887516
NCBI-ProteinID:
XP_003958654
UniProt:
H2AYW3
LinkDB
All DBs
Position
8:complement(198047..199129)
Genome browser
AA seq
360 aa
AA seq
DB search
MSLWVDKYRPKSLKTLSHSSDLTELLTSLSEHPRDLPHLLLYGPNGSGKKTRCMALLESI
FGPGVYRLKIDIRQFVTASNRKLELNVVSSPYHIEITPSDMGNNDRIVIQELLKEIAQME
QVDFENSKEGLAHRYKCVIINEANSLSRDAQAALRRTMEKYSKNIRLIMLCDSMSSIIAP
IKSRCLLIRCPAPANDELVSILSRIVTEENVQLESGVILNNIAKEANGNLRVATLMLESM
ALSNEMQLKTSTTIIKPDWIVVVTSMANKIQRERTVGCLVECRAVLYDLLSHCIPAKTIL
QELTFALVNSPIPGIITQNKMIKIIDLASTFDERLSLGNKAIFHLEGFIAKCMVAIDSDI
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccttatgggtagataagtaccgtccaaagtctttaaaaacattatcacatagcagc
gatttgacagagctgctaacttcgttgtcagagcatcctcgtgatttacctcatctctta
ctgtatggtccaaatggtagtggtaagaaaactagatgtatggctttattagagtccatc
tttggtccaggtgtctatagactgaaaattgatattagacagtttgtgactgcctctaat
aggaagttggaattgaatgtcgttagttcaccttaccatatagagattactccaagtgat
atgggtaataatgatagaattgtcatccaagaactgttgaaagagattgcacagatggaa
caggttgatttcgaaaattccaaggaaggtttagcacatagatacaagtgtgtaattatc
aatgaggcaaactcattgagtagagatgctcaggcagcattaagacgtacgatggaaaaa
tattcgaaaaatatcagattgatcatgttatgtgactcaatgtcttccatcatcgctcca
atcaagtcgcgttgcttacttatacgttgtcctgcacctgctaacgacgaacttgtcagt
attttgagcaggattgttactgaagagaatgttcaattggaatctggcgtaatcttgaat
aatattgcaaaagaagcaaatggaaaccttagggtagctacattgatgcttgaatctatg
gcattgagtaacgaaatgcagttgaaaacgagtacaacaataatcaagccagattggatt
gttgttgtcacaagtatggccaataaaattcagagggaaagaactgtcggttgtctagtt
gaatgtcgtgcagtattatacgatttactttctcattgcattccagctaaaacaattttg
caggagttgacatttgcgttagtaaatagtcccataccaggcatcataacccaaaacaag
atgatcaaaattattgatttggcaagcacattcgatgaaagattgtccctgggaaataaa
gcaatcttccacttggaaggattcatagccaaatgtatggttgctatcgacagtgatata
tag
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