Kazachstania africana: KAFR_0H01600
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Entry
KAFR_0H01600 CDS
T02487
Symbol
KAFR0H01600
Name
(RefSeq) hypothetical protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
kaf
Kazachstania africana
Pathway
kaf03420
Nucleotide excision repair
kaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0H01600 (KAFR0H01600)
03460 Fanconi anemia pathway
KAFR_0H01600 (KAFR0H01600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kaf03032
]
KAFR_0H01600 (KAFR0H01600)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0H01600 (KAFR0H01600)
DNA replication proteins [BR:
kaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
KAFR_0H01600 (KAFR0H01600)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
KAFR_0H01600 (KAFR0H01600)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
13887567
NCBI-ProteinID:
XP_003958705
UniProt:
H2AZ14
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All DBs
Position
8:296523..299762
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AA seq
1079 aa
AA seq
DB search
MSELRLFVPEDDSDDENLQQELSRQEEAIIGSSIKETSTLEAIKGENEDAMQSVDEIREE
DEDESPLYPLIPIDEDEGSDLKPKIKDIRPVDIFVSLPLPFQQKVVESCLVSDDPLVIMG
KGLGMANVVANLTHVLATPTIIDGQIKRSLVIILNATANDNRQIGEELRELSWLSSNNVD
DATGFREQNEDAEDRPFNVVTAESSSVEKRRKLYLSGGTVSVTSRILIVDLLSGILHPNK
ITGMIVLNVESLRSYSNESFILEIYRSQNKWGFIKGFSESPEPFTMEFSPLMRRMRELRF
KNILLWPRFRVEVSNTLNPVAQQSNKVIEVKVSLTDSMAQIQFGLMECLKKCIGELNRKN
PGLSLEWWDINNVLDKYFLKSIDSVMMPNWHRISFESKQLVKDIRFLKRLLKLLIKADAV
DFYEEIQLSLDANKPSITHKYTESPWLMAEESQLVISHARKRIYYKDEYILEEAPKWEQL
VRILDDISHQRLTKGFSGPTCIVCSEKSTAAQLTKIVHSADKKDGFRKNMLKKLKLYKDR
REASKQLVKQVKEKDSDSLQRELNVSTTFAKEQPITKRRRTRGAAAVAAVERLRSSGGGE
DIESVIDSYNPEQELGRTRNDGYEEDGDSFEEPDDELLITDIIDSQDTELYLEQKYIVEP
EEQEYYKTTPSFTSGLTEDIWNERIDNFSYVERNEQVIIETFGNIIDDSFLQETMPSYII
MFEPDLSFIRKVELYRAIQKENPPKIFFMYYGESVEEQGHLLAIKREKDAFTKLIKENAQ
LASHFEAEEDLSHFKNLAERKMKLNKLRRTNTRNAGGQKGYQHFTQDVVIVDSREFNATL
PGLLFRYGVRVIPCMLSVGDYIISPDICIERKSIADLIGSLQNNRLAVQCKKMVQYYKYA
TLLIEFDENQSFSLEPFSERRNYRKQDISTTHPISSKLSQDEIQRKLSRLVMKFPTLKII
WSSSPLQSVNIILELKLGRDQPDPNLAVSYGTHLRKNFKQKPDNKKKTSNDEAFSTIMNI
PGISKIDYFNIRKKIKSYSVLTKMNVMELNDVLGDYETSVKVHDFLRKDEEEEEHDDSD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgcgtttgtttgttccggaagatgattcagacgatgagaacttgcaacaa
gaactatctagacaggaggaagctattattggaagcagcatcaaagagacatctacactt
gaggcgattaaaggtgaaaatgaggatgcgatgcaatctgtcgatgagatacgagaggaa
gatgaggacgagtctccattgtatcccttaatacctattgatgaagacgaaggttctgat
ttaaagccaaaaatcaaagatatacgacctgtggacatattcgtgagtttgcccttacca
tttcaacagaaagtggttgaaagttgtctggtctcggatgacccattggttattatgggg
aaaggcctaggtatggctaatgttgttgcaaatttgacacatgtcttggcaacccccaca
ataattgacggccagataaagaggtcgttggtcataatacttaatgccactgcgaatgac
aaccgtcaaattggtgaagagttgagggaattgtcttggctgagtagcaataacgtcgat
gatgctactggctttcgcgaacaaaatgaagatgcagaagatagacctttcaatgttgtt
acagcagaatcttcaagtgttgaaaagagaagaaaattgtacttatcgggtggaactgtc
agtgttacatctagaattctcattgtcgatctcttgtcgggtattctacatcctaacaaa
attactggtatgatagtcttgaatgtggaatcacttagaagttactccaacgaatctttc
atattggaaatatataggtctcaaaacaaatgggggtttatcaagggattctctgaatca
ccagagccattcacaatggagttttcgccactaatgaggagaatgagagaacttagattc
aaaaatattctactgtggcctcgattccgtgtagaagtctcaaatactctaaatcctgtt
gctcagcaatctaacaaagttatagaagtaaaagtctctttaactgattcaatggctcaa
attcaatttgggcttatggagtgtctaaaaaaatgcattggagaattgaatcgtaagaat
cctggactgtctttggaatggtgggacattaacaatgttctagacaaatacttcctgaaa
tccatcgattctgtaatgatgccaaattggcatagaatatcctttgaatcaaaacaactg
gtgaaagacatcagatttttgaaaagacttttaaaacttctgattaaggcagatgctgtt
gacttttatgaggaaattcaactaagcttggatgcgaataaaccttccattacacacaaa
tacactgaatctccctggctcatggcagaggagtcacagctcgttatttctcatgcaagg
aaaagaatatattacaaagatgaatatatcctggaagaagctccaaaatgggagcaactc
gtgagaattttagatgatatttcgcatcaaaggttaacaaaaggattttcaggtccaact
tgcattgtttgctcagaaaaatctacagctgcccaattgacaaaaatagtgcattctgct
gataaaaaggatggctttagaaagaatatgttgaaaaaactgaaactctataaagataga
agagaagcaagtaaacaattggtaaaacaggtaaaagagaaagattcagattctttacaa
cgggaactaaacgttagtactacatttgcaaaggaacaaccgattacaaagagaaggaga
actagaggagctgcagctgttgcagctgtcgagagactaaggagttcaggaggcggtgaa
gacatcgagtcagtaattgattcctataatccggagcaagaactcggtaggacacggaac
gatggatatgaggaagatggtgactcctttgaagagccagatgacgaacttttgattact
gacattattgattcacaggacaccgaactgtatctagagcagaaatatattgttgaacct
gaagaacaggaatattacaaaacaacaccatcatttacttctggcctaacagaagatata
tggaatgagagaattgacaattttagttatgtcgaaagaaatgagcaggttattatcgag
acttttggaaatattattgatgattcttttcttcaggaaaccatgccctcatatattata
atgttcgaaccagatttatcctttataagaaaagtggaactttacagggcgatacaaaaa
gagaatccacctaagatttttttcatgtactatggagaaagtgtagaggaacagggtcac
cttcttgccattaaaagggaaaaggatgcctttacaaaactaataaaagaaaatgctcaa
ttagctagccattttgaagcagaagaggacttatctcacttcaagaatttagcagaaaga
aaaatgaagttgaacaagcttcgtcgaacaaatacaaggaatgcaggtgggcaaaagggt
tatcagcattttactcaggatgtggtaattgtggattcacgtgaattcaacgcaacatta
ccaggacttctattcaggtacggtgtaagggtaataccatgcatgctatctgttggtgac
tatattataagcccagatatctgtatagaaagaaagtccatagccgatttgattggttct
ctgcaaaataatagattggcagtacaatgcaaaaaaatggtacaatactataagtacgca
acgctattaattgaattcgacgaaaatcaatctttctcattggagccattcagtgaaagg
cgcaattatagaaaacaagatatctcgacaacacacccgatatcgagcaaactttctcag
gatgaaattcaacgaaagttatcgagactagtcatgaaatttccaactctaaaaattata
tggtcctcttcaccattacagagtgttaatatcattttagagctaaagttgggcagagat
cagccagatccaaatttagcggtttcatacggtacccatttgagaaagaatttcaaacaa
aagcctgacaataagaagaaaacaagtaatgacgaagcattttcaactataatgaatatc
ccaggaatttctaaaatagattatttcaatattcgaaaaaaaattaaatcatattctgtc
ctaaccaaaatgaatgtcatggagttgaatgatgtcttgggagattacgaaacctctgtt
aaagttcatgattttttgcgaaaagatgaagaagaagaggaacatgacgatagcgactag
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