Kazachstania africana: KAFR_0H02820
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Entry
KAFR_0H02820 CDS
T02487
Symbol
KAFR0H02820
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
kaf
Kazachstania africana
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaf03019
]
KAFR_0H02820 (KAFR0H02820)
03041 Spliceosome [BR:
kaf03041
]
KAFR_0H02820 (KAFR0H02820)
03036 Chromosome and associated proteins [BR:
kaf03036
]
KAFR_0H02820 (KAFR0H02820)
Enzymes [BR:
kaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAFR_0H02820 (KAFR0H02820)
Messenger RNA biogenesis [BR:
kaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
KAFR_0H02820 (KAFR0H02820)
mRNA cycle factors
Common to processing body (P body) and stress granule
KAFR_0H02820 (KAFR0H02820)
Spliceosome [BR:
kaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
KAFR_0H02820 (KAFR0H02820)
Chromosome and associated proteins [BR:
kaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
KAFR_0H02820 (KAFR0H02820)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
13887687
NCBI-ProteinID:
XP_003958826
UniProt:
H2AZD5
LinkDB
All DBs
Position
8:537121..538956
Genome browser
AA seq
611 aa
AA seq
DB search
MSELQEQIGNLSISEDKKQNGQTDRSYVPPHMRNKKVSRTSNNGPSVQPNRGFFSSRPSR
QKTGSFFGGSAPRQDEYHGFSSRWVDGKHIPGPRNEGLELKLFGEASESHGSGGINFDNY
DDIPVEASGEDVPDPIMEFTSPPLEELLLENIKLARFTKPTPVQKYSIPIVSKNRDLMGC
AQTGSGKTGGFLFPILSEMFINGPLNVPDKSRNHYMRKGYPTALVLAPTRELATQIFEES
RKFTYRSWVRPCVVYGGAPIGNQMRELDRGCDLLVATPGRLNDLLERGKISLMNVRYLIL
DEADRMLDMGFEPQIRHIVEDCDMPEVQDRQTLMFSATFPRDIQHLARDFLKNYVFLSVG
RVGSTSENITQKIIMVEDMDKKSALLDLLAYQHEGLTLIFVETKRMADQLTDFLIMQNFN
ATAIHGDRTQEERERALGAFKAGRADILVATAVAARGLDIPNVTLVINFDLPSDIDDYVH
RIGRTGRAGNTGVAISFFNSNNTNIVKGLVEILEEANQEIPQFLKDAIRRPLMSRGSGKF
GNRGGSGFGNRHENTRDYRKHTSTRGGAASSSWASTASRGGRSGNGWNGAVNDSDSFWNG
GKESGSSASWW
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttacaagaacagattggaaacctcagcattagcgaggacaagaagcaaaat
ggtcaaacagatcgttcttacgttcctcctcacatgagaaataagaaagtgagtagaact
agtaataatggtccctccgttcaaccaaatagaggattttttagcagtagaccttctcgt
caaaagacagggtcgttttttggtggttccgctcctcgccaggatgagtatcacggcttc
tccagtagatgggtcgatggtaagcatattccaggtcctagaaatgaggggttagaacta
aaattatttggtgaggcttctgaaagtcacggttcaggaggtatcaatttcgataattat
gatgacatccctgtggaagcctctggtgaagacgtccctgaccctattatggaatttacg
tcgcctcccctagaagaattattactagaaaatattaaacttgcaagatttactaaacca
actcccgttcaaaaatattccattcctattgtcagtaaaaatagagatttgatgggttgt
gctcagactgggtctggtaagactggtgggttccttttccccatactttccgaaatgttc
attaacggtccattgaacgttccagataaatcaaggaaccattacatgaggaagggttat
cccacagcattagtgctggcacctactagagaactagccacacaaatttttgaagaatca
agaaaattcacgtacagatcatgggtaagaccttgtgttgtttatggtggtgcccccatc
gggaatcagatgagagaactcgatcgtggttgtgacctattggtggctactcccggtaga
ttaaatgatttactggaacgtggtaaaatttcactgatgaatgtcagatatttaattctg
gatgaagctgatagaatgctagatatggggtttgaaccacaaattagacacattgtagaa
gattgtgatatgcctgaagttcaagataggcagacattgatgttttccgctactttccca
agagatattcaacatttagcaagagatttcttaaaaaattatgttttcttatctgttggt
agagtagggtccacttctgaaaatattactcaaaaaatcataatggtggaagatatggat
aaaaaatctgctttattagatttactagcttatcaacacgaaggtttaacattaatcttc
gtagagactaaaagaatggcagatcaattaactgatttcttaattatgcaaaattttaat
gctactgccattcatggtgacagaacacaagaagaacgtgaacgtgctttaggcgctttc
aaagctggaagagctgatatcttagtggcaaccgctgtggccgctagaggtttagatatc
ccaaatgttacattggttataaatttcgatttgccttcagatattgatgattatgttcat
agaattgggagaactggtcgtgccggtaatacaggtgtcgcaatttcattttttaattca
aataatacaaacattgtcaagggtttagtcgaaattctagaggaggcaaatcaggaaatc
ccacaatttttgaaagatgcaattagaagaccattaatgtcaagaggaagtggcaaattt
ggtaatagaggtggtagtggatttggtaaccgtcacgagaacacgagagattaccgtaaa
catacttcaactcgtggaggggctgccagcagctcctgggcatctactgcttcaaggggt
ggtagatctggaaatggttggaacggcgctgtcaatgacagcgattcattctggaacggt
ggtaaagagtcaggaagttctgcttcttggtggtaa
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