Kazachstania africana: KAFR_0K00540
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Entry
KAFR_0K00540 CDS
T02487
Symbol
KAFR0K00540
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
kaf
Kazachstania africana
Pathway
kaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KAFR_0K00540 (KAFR0K00540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0K00540 (KAFR0K00540)
Enzymes [BR:
kaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KAFR_0K00540 (KAFR0K00540)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
KAFR_0K00540 (KAFR0K00540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
13886598
NCBI-ProteinID:
XP_003959544
UniProt:
H2B1A9
LinkDB
All DBs
Position
11:complement(114196..119184)
Genome browser
AA seq
1662 aa
AA seq
DB search
MDIAKPVGSEITSVDFSILTSKDIRSLSAKQIINPTVLDNLGHPISGGLYDLSLGAFLRN
LCTTCGLDEKFCPGHVGHIELPVPVYNPLFFNQLYIYLRSSCLFCHHFRLKSAEVHRFAL
KLKLLQYGLIDESYKLDEIAVGDLQHLMDEAENDEAMEDNTLNGGSVKASDTKNVSAQWL
KELKRKRTEYVDLVIAKALSDGRTTERGTFTATVNDERKRLIHEFHKKILARPKCDNCGM
FSPKFRKDGFTKIFETALTDKQLTNNRVKGFIRQDMINKQEQAKQLAGQDIDSDKTFDIG
RNPASKPKTGSTYILSTEVRNILNAVFRKEQMVLQYIFHARPNLSKKYVSADAFFMDVVV
VPPTRFRLPSKLGEEVHENSQNQLLSKILTTSLLIRDLNDEMSKLQKDKVSVDDRRIIFS
RLMNAFVTIQNDVNAFIDSTKAQGNTSGKVPVPGVKQALEKKEGLFRKHMMGKRVNYAAR
SVISPDPNIETNEIGVPPVFATKLTYPEPVTSFNIAELRQAVINGPDKWPGATQIQNEDG
SLVSLIGMSAEQRKALANQLMTPTSHNGATHTLNKKVYRHIKNRDIVIMNRQPTLHKASM
MGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEAFNLANTDSQYLTP
TSGSPVRGLIQDHISAGVWLTNKDSFFTREQYQQYIYGCIRPEDGHATRAKLATVPPAVM
KPVPLWTGKQIITTVLLNITPPDMPGINLKSSNKIKNDYWGKGSNENEVIFKNGELLCGI
LDKSQYGASKYGIIHCLHEVYGPDVSAKALSVLGRLFTNYITATAFTCGMDDLRLTEEGN
KWRKEILKTSVDTGREAAAEVTNLPKDTPSNDPELLKRLEEIIRDNNKSGILDAVTSSKV
NTITSKVVSTCVPGGTMKKFPENSMQSMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVM
VSGKTLPSFKPYETDARAGGYIKGRFYSGIRPQEYYFHCMAGREGLIDTAVKTASSGYLQ
RCLTKQLEGVHVSYDNSIRDADGTLIQMLYGGDAIDVTKESHLTKFNFCLENYDALLKKY
NPSALIEHLDVETALKYSKKSLKYRKKHAKEAHYQQTVKYDPILSKYNPAKYLGSVSENF
QDQLENFLHDNSKLLKSHEDVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQM
TLNTFHFAGHGAANVTLGIPRLREIIMTASAAIKTPQMTLPILDDVTDEQADTFAKSISK
VVLSEVIDKVVVTETSGSSVNNADALSYVINMKFFDEAEYNDEYDVSKEELQEVISTHFL
HELETAIVKEIRKQKRTTVPDVGMAVPRLQEISESTNTKRMDEDNDDEEYHKKTKQAVSY
DEPDEDEIETMRQAEKSSDEEDFNSDKESDSESESDDESEELQNELNKTIEDANKNMSKT
QRDRQSAIISNHRFVAKYNFDDESGKWCEFRLELAADTEKLLMVNIVEDICRKSVIRQVP
KIDRCVHPEPENGKRVLVTEGVNFNAMWDQEDFIDVDGIRSNDVSAVLKTYGVEAARNTV
VNEINNVFSRYAISVSFRHLDLLADMMTRQGTYLAFNRQGMETSTSSLMKMSYETTCQFL
TKAVLDNEREELNTPSARIVLGKLNNVGTGSFDVLAKVPNAA
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggatattgctaaaccagtcggttccgaaatcacatctgttgatttcagtatcttgact
tccaaagatattagatctctttcagccaaacaaattataaatccaactgtcctagacaac
ttgggtcatccaatctctggtggtttatacgatttgtctctgggtgcattcttaagaaac
ttatgtaccacctgtggtctcgacgaaaagttttgtccaggtcatgtgggtcatatcgaa
ctacctgtacctgtttataatcctctttttttcaaccaattatacatatatttgagaagt
tcatgtcttttctgtcatcatttcagattaaaatctgctgaagtccacagatttgcttta
aaattgaaattattacaatatggtctcattgatgaatcttacaaattggatgaaattgct
gtaggtgatttacaacatttgatggatgaagctgaaaatgatgaagccatggaagataac
actttgaatggtggatctgtcaaagcctccgatactaaaaatgtgtctgctcaatggtta
aaagaattgaagagaaagcgtactgaatacgtagacttggtcattgcaaaagccttatca
gatggtagaaccactgaaagaggtactttcactgctaccgttaacgatgaaagaaaaaga
ttaatccatgaattccataagaaaatattggcaagaccaaagtgtgacaactgtggtatg
ttctccccaaaattcagaaaagatggtttcacaaagatttttgaaactgctttaactgat
aaacaattaaccaacaacagagtcaaaggtttcattcgtcaggatatgatcaataaacaa
gagcaagctaaacaactggctggccaagatattgacagtgacaaaacttttgatatcggt
agaaacccggcttctaaaccaaagactggttctacatatattttatccaccgaagttaga
aacattttaaatgctgttttcagaaaagaacaaatggttttacaatatattttccatgct
agaccaaacttatccaaaaaatacgtttctgccgatgcattcttcatggatgtcgttgtc
gttccaccaactagattccgtttaccttccaaattgggtgaagaagttcacgaaaacagt
caaaatcaattattatccaagattttaactacttctttattgatcagagatttaaatgat
gaaatgtctaaactacaaaaggataaggtatctgtcgatgacagaagaatcattttcagt
agactaatgaacgctttcgtcactattcaaaatgacgttaacgcttttattgattctaca
aaggcacaaggtaacaccagtggtaaggtcccagttccaggtgtcaaacaagctcttgaa
aagaaagaaggtctattcagaaagcatatgatgggtaagcgtgttaactacgctgctcgt
tccgttatctctccagatccaaatatcgaaaccaacgaaattggtgttcctccagttttc
gcaaccaaattgacttatcctgaacctgttacctcttttaacattgcagaattgcgtcaa
gccgtcattaatggtccagacaaatggccaggtgctactcaaattcaaaatgaagatggc
tccctagtttctttgattggcatgtccgctgagcagcgtaaggcattagccaaccaatta
atgacaccaacatctcacaacggtgctacacatactctaaacaagaaggtttaccgtcat
attaagaacagagatattgttatcatgaaccgtcagccaactttacataaggcttctatg
atgggtcacaaagtcagagttctacctggtgagaaaactttacgtttacattatgctaat
actggtgcctataatgccgattttgatggtgacgaaatgaatatgcatttcccacaaaat
gaaaacgccagagctgaagctttcaacttagccaacactgattctcaatatttaacacca
acctctggttccccagttagaggtttaattcaagatcacatctctgcaggtgtttggtta
actaataaagacagttttttcactagagaacaataccaacaatatatttacggttgtatt
cgtccagaagatggacatgcaacaagagctaagttggccactgttccaccagctgtcatg
aaaccagtcccattatggaccggtaagcaaattattacaaccgttctcttaaatatcacg
ccaccagatatgccaggtatcaacttaaaatcaagtaacaaaattaaaaatgactattgg
ggtaaaggttccaatgaaaatgaagtcattttcaaaaatggtgaattactatgcggtatt
ctagataagagtcaatatggtgcttctaaatatggtattattcattgtttacatgaagtt
tatggcccagatgtttctgccaaggcattatccgttttaggcagattatttactaattat
atcaccgcaaccgcttttacttgtggcatggatgatttacgtttgactgaagaaggtaac
aaatggagaaaggaaattttaaagacatctgttgataccggtcgtgaggctgctgcagaa
gtcactaatttgcctaaagatacaccatctaatgatcctgaattattgaagcgtttggaa
gaaattatccgtgacaataacaaatctggtattcttgatgctgtcacctcttctaaggtg
aatactatcacttctaaggttgtttccacttgtgttcctggtggtacaatgaaaaagttc
ccagaaaattccatgcaatctatggctttatctggtgccaagggttctaacgttaacgtt
tctcagattatgtgtcttttaggtcaacaagctttagaaggtagaagagtacctgtcatg
gttagtggtaaaactttaccatcttttaagccttatgaaactgatgccagagctggtggt
tatattaagggtcgtttctactctggtataagaccacaagaatattacttccattgtatg
gctggtcgtgaaggtttgattgatactgctgtgaagactgcttcttctggttacttacaa
cgttgtttgaccaaacaattagaaggtgtccacgtttcctatgataacagtatcagagat
gcagatggtacattaatccaaatgttatacggtggtgacgctatcgatgttactaaggaa
tctcatttgaccaagttcaacttctgtctggaaaactacgatgctttgttgaagaaatac
aacccatctgcattaatcgaacacttagatgtcgagacagctttgaaatactcaaagaag
tcattgaagtacagaaagaaacatgccaaggaagcacattaccaacaaacagtgaaatac
gatccgatattgtccaagtacaatcctgctaagtacttagggtctgtttctgaaaatttc
caagatcaattagaaaatttccttcatgacaatagtaaattattgaaatctcatgaagat
gttaatgaaaagaagttcagagctttgatgcaattaaaatacatgcgttctttaattaat
ccaggtgaagctgtaggtattattgcgtcacaatctgttggtgaaccatctacacaaatg
acattaaacactttccattttgctggtcacggtgctgcaaatgttaccttaggtattcct
cgtttaagagaaattattatgactgcttctgctgccatcaagaccccacaaatgacctta
cctatactagatgatgtcactgatgaacaagctgatactttcgctaagtccatttctaag
gttgtcttgtctgaagtcattgataaggttgttgttactgaaacatccggttcctctgtc
aataacgcagatgctctttcgtatgttattaacatgaaattcttcgatgaagctgaatat
aatgatgaatacgatgtatctaaggaagaactacaagaagtcatttctacacatttctta
catgaattggaaactgctattgtcaaggagatcagaaagcaaaagagaactacagtacca
gatgttggtatggctgttccaaggttgcaagaaatctctgaaagtaccaacacaaagaga
atggatgaagataatgatgatgaagaatatcacaagaagactaagcaagctgtttcttat
gatgaaccagatgaagatgaaattgaaacaatgagacaagctgaaaaatcatccgatgaa
gaagatttcaattctgacaaggaatccgactctgaatccgaatctgatgatgaaagtgaa
gaattacaaaatgaattaaataagactattgaagatgccaataagaacatgtccaagaca
caacgtgaccgtcaatctgctatcatatcaaaccacagatttgttgctaaatacaatttc
gatgatgaaagtggtaaatggtgtgaatttagattggaattagctgctgacacagaaaag
ttactgatggttaacatcgttgaagacatctgcagaaaatctgttattagacaagttcca
aagattgaccgttgtgttcacccagaaccagaaaatggtaagcgtgtcttggtcactgaa
ggtgttaacttcaacgctatgtgggatcaagaagatttcatcgatgtcgatggtatcaga
tctaatgatgtttctgctgtgttgaagacgtatggtgttgaagctgccagaaatactgtc
gttaacgaaattaacaatgttttctcacgttatgccatttctgtttctttccgtcatttg
gacttacttgctgatatgatgactagacaaggcacttacttagcattcaacagacaaggt
atggaaacatctacttcatctttgatgaagatgtcctacgaaactacctgtcaattctta
actaaggctgttttggacaatgaacgtgaagaattaaatactccttcagccagaattgtt
ctaggtaagttgaacaacgttggtacaggctcattcgatgttttggccaaggttccaaac
gctgcatga
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integrated database retrieval system