Kazachstania africana: KAFR_0L00250
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Entry
KAFR_0L00250 CDS
T02487
Symbol
KAFR0L00250
Name
(RefSeq) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
kaf
Kazachstania africana
Pathway
kaf03040
Spliceosome
kaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KAFR_0L00250 (KAFR0L00250)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
KAFR_0L00250 (KAFR0L00250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kaf03041
]
KAFR_0L00250 (KAFR0L00250)
04121 Ubiquitin system [BR:
kaf04121
]
KAFR_0L00250 (KAFR0L00250)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0L00250 (KAFR0L00250)
Enzymes [BR:
kaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
KAFR_0L00250 (KAFR0L00250)
Spliceosome [BR:
kaf03041
]
Complex B
Other components
Prp19 complex
KAFR_0L00250 (KAFR0L00250)
Complex C
Prp19-CDC5 complex
KAFR_0L00250 (KAFR0L00250)
Ubiquitin system [BR:
kaf04121
]
Ubiquitin ligases (E3)
U-box type E3
KAFR_0L00250 (KAFR0L00250)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
KAFR_0L00250 (KAFR0L00250)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
13886840
NCBI-ProteinID:
XP_003959767
UniProt:
H2B1Y2
LinkDB
All DBs
Position
12:complement(42271..43770)
Genome browser
AA seq
499 aa
AA seq
DB search
MLCAISGKPAKIPVLSPSSKCIFEKSLIENYINETGKDPITNASITVDSLIPVSLHEQQL
SYTNSLNSSTLNSNYSVPNLLSTLQNEFDAIMLENFKLRKTLDIMSKKLSTALYERDAAK
LVAANLLNEKKTTLEDITMIVSNINDENSSMEKFNDTLMSESKSFVKLTKKNKYGSNLQC
DWKLSTKYLYSLSDHPSLKTVTSLQGNTIKSAVYDDSKKAFIVMDGSVETNSEAPYDSQN
PFKYITITNSRKILFQDSENKVFTYDIDSQQVLQSIELQSGAIFINEHEYIMKDYFLIVE
TTGKAIFKPYSGGKTINILPGSSFDKYHSASLHKDGILLALVNDTNVDIYNLLKPNELPT
TFRLNNEIKEGNMIKMVQFASNGYWMIVRTDSHVFSFDLRSDPGTLAIEPLPVDADVLID
LHHSGRFLVTVKKEDMKLLIQSFQYTKYTNGKKWELENDTTVKLTKKANSEIDSIHLLYD
DKNHCEIILKYETFVKYIK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctatgtgccatcagtgggaaacctgctaagataccggtgctttcaccaagttcaaaa
tgtatttttgagaaatctttgatcgagaactatatcaatgaaactggtaaagatccaatc
acaaacgcttcaataacggtggatagtttgattccagtttctttgcatgaacagcaactg
tcctatacaaactctttaaactcatccacgctcaattcaaactatagtgtaccaaattta
ttgtctacgttacaaaatgaattcgatgcaattatgttggaaaatttcaaattgaggaaa
actctggacataatgtcaaagaaactttccacagccctctatgaaagggatgctgctaag
ttagtggcggcaaatctgctgaatgaaaagaaaacgactctagaggacatcactatgatt
gtttcaaatattaacgatgagaattcatcaatggagaaatttaatgatactttgatgagt
gaatccaagtcttttgtgaaattaacgaagaaaaacaagtacggttccaatttacaatgt
gactggaagttatccactaaatatttatattcattatctgatcatccaagtttaaaaacc
gttacaagtttacagggcaataccatcaaatcagcagtatatgatgactctaagaaggca
tttattgttatggatggatctgtagaaaccaattcagaagccccctacgattcacaaaac
cctttcaagtacatcactataacaaattcaaggaaaattctgttccaagactcggaaaat
aaagtttttacctacgacattgactcacaacaagtacttcaatcgatagaattacaaagc
ggcgccatcttcatcaatgaacatgaatacataatgaaagactacttcctgatagtagag
acgacggggaaggccatttttaagccctatagtggcggtaaaactataaatatactgcct
ggcagttccttcgataagtaccactctgcatccttgcataaagatggcattcttttagca
ctagttaatgacacaaatgtcgacatctataacttactgaaaccaaatgagttaccaaca
actttccgtttaaacaatgaaatcaaggagggaaacatgattaagatggtacaatttgcc
tcaaatgggtactggatgattgtcaggacggattcacacgtattttcttttgatttaagg
tcggatcctggcaccttggccatcgagccattaccggtggatgccgatgtattaatcgat
ctacaccattctggaaggttcctagtgacggtaaagaaggaagatatgaagcttctcatt
cagagttttcaatatacgaaatataccaatgggaagaaatgggaactagaaaatgatact
acggtcaagctaactaaaaaagcaaattcggagatagactcaattcatttactttatgat
gacaagaaccactgcgagatcatcttgaagtatgagacatttgtgaaatatataaagtaa
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