Kaistia sp. 32K: K32_15920
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Entry
K32_15920 CDS
T06998
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kai
Kaistia sp. 32K
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kai03016
]
K32_15920 (rnd)
Enzymes [BR:
kai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K32_15920 (rnd)
Transfer RNA biogenesis [BR:
kai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K32_15920 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF1858
Motif
Other DBs
NCBI-ProteinID:
BCP52975
UniProt:
A0A7R7T5D1
LinkDB
All DBs
Position
complement(1749307..1750485)
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AA seq
392 aa
AA seq
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MTDIITTTEALAAACDRLSRFEFVTVDTEFMRETTYWPKLCIIQIASTDEAVIIDAEAPG
LDLAPFFALMANDQVVKVFHAARQDIEIVWHLGGILPHPIFDTQVAAMVCGFGESISYDQ
LVGRITGHSIDKSSRFTDWSRRPLTPQQVDYAIADVTHLRDVYKALKQKLDKQNRNDWVA
EEMDVLTSVDTYQVDPANVWKRLKMRIKKPLQLAVLMEIAAWREREAQARDVPRGRILKD
DAIYEIAEQHPTTAEALARLRTIPRGFERSRTGEDILAAVKRAVDLPKDKLPKVPKVKPA
SDGNGAAVDLLKVLLKMTSEEHGVAARVIATVDDLEAIAGDSNADVAPLQGWRRELFGEQ
ALKLKRGDISLRLDGRKVTIVGNQPKPAIEAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatcattacgacaactgaagccctcgccgccgcctgcgatcgcctatcccgg
ttcgaattcgtcaccgtcgataccgagttcatgcgcgaaaccacgtactggccgaagctc
tgcatcatccagatcgcgagcacggacgaagcggtgatcatcgacgccgaagccccgggt
ctcgacctcgcgcccttcttcgcgctgatggccaacgaccaggtggtgaaggtcttccac
gccgccaggcaggacatcgagatcgtctggcatctcggcggcatcctcccgcatccgatc
ttcgatacccaggtcgcggccatggtctgcggcttcggcgaatcgatcagctatgaccag
ctggtcgggcggatcaccggccactcgatcgacaagtcctcgcgcttcaccgactggagc
cgccggccgctgacgccgcagcaggtcgactacgcgatcgccgacgtcacgcatctgcgc
gacgtctacaaggcgctgaagcagaagctcgacaagcagaaccgcaacgactgggtcgcc
gaggagatggacgttctcacctcggtcgatacctaccaggtcgatccggcgaatgtctgg
aagcggctcaagatgcggatcaagaagccgctgcagctcgccgtactgatggaaatcgcc
gcctggcgcgagcgcgaggcgcaggcccgcgacgtgccgcgcggtcgcatcctgaaggac
gacgcgatctacgagatcgccgagcagcatccgaccacggccgaggcgctcgcgcggctg
cgcaccattccgcgcggtttcgagcggtcgcgcacgggcgaggatatcctcgccgccgtc
aagcgcgcggtcgacctgccgaaggacaagctgcccaaggtgccgaaggtgaagcccgcc
tcggatggcaatggcgcggcggtggaccttttgaaggtcctgctcaagatgaccagcgag
gagcacggcgtcgccgcgcgcgtgatcgcgacggtcgatgatttggaagcgatcgccggc
gacagcaatgccgatgtggcgccgctgcagggttggcgccgcgaactgttcggcgagcag
gcgctcaagctgaagcggggcgacatctcgctcaggctcgacggccgcaaggtgacgatc
gtcggcaaccagccgaagcccgccatcgaagccgcctga
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