Kaistia sp. 32K: K32_20650
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Entry
K32_20650 CDS
T06998
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kai
Kaistia sp. 32K
Pathway
kai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K32_20650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kai03019
]
K32_20650
03009 Ribosome biogenesis [BR:
kai03009
]
K32_20650
Enzymes [BR:
kai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K32_20650
Messenger RNA biogenesis [BR:
kai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K32_20650
Ribosome biogenesis [BR:
kai03009
]
Prokaryotic type
rRNA helicases
K32_20650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DUF7120
Motif
Other DBs
NCBI-ProteinID:
BCP53448
UniProt:
A0A7R7T5T3
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All DBs
Position
complement(2259360..2261216)
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AA seq
618 aa
AA seq
DB search
MVSLVQNPALARALAEKGYETLTPVQTAVLQDNVGENDLLVSAQTGSGKTVAYGLAFAST
LLGTEESFGPAAEPLALIIAPTRELALQVQRELIWLYGPAGARIASCVGGMDVRREARAL
DMGAHIVVGTPGRLRDHLERGRLDISKLRVVVLDEADEMLDLGFKEDLELILDASPKERR
TLLFSATLPREIVRLARQYQRDALRIDTIDQSQPHGDIEYRAFRVAPNEIDLAVVNVLRF
YEQPAALVFCSTRESVKRVHAGLQERGFEVVALSGELSQTERMHALQALRDGRARVCVAT
DVAARGLDLPDLGLVIHAELPTGPAILLHRSGRTGRAGRKGVSALLVPYTNRAKALRLIN
AAGVDAYWTAAPSADEIRAKDQERLLESLLRVEPASEEDAVLVRELVGQRSAEEIAAALI
RTYRARLPSPEDLFDPGQQQDRGPRDSKPRRDGPRQERGDRDAPRGERPPRAPRDNDGQW
PTSGPGSENGRVERPQQDMVWFRMSVGHQKNADPKWLLPLICRRGHVTKNEIGAIKIFER
DTRFEIAADAADRFMVALRRGGEEEIRIEPADGAPAGGAGARGPGKKPTRRAGFKPGGKP
GGKPGFKPGFKKRDRNDG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgctcgtccagaacccggccctcgcccgcgccctcgcggaaaagggctatgaa
acgctgacccccgtccaaaccgccgtcctccaggacaatgtcggcgagaatgatctgctg
gtttcggcgcagaccggttccggcaagaccgtcgcctatggcctcgccttcgcctcgacg
ctgctcggcaccgaagagagcttcggcccggcggcggagccgctggcgctgatcatcgcg
ccgacccgcgaactggccctgcaggtgcagcgcgagctgatctggctctatggcccggcc
ggcgcccgaatcgcctcctgcgtcggcggcatggacgtgcgccgcgaagcgcgtgcgctc
gacatgggcgcgcatatcgtcgtcggcacgccgggccgcctgcgcgaccatctggagcgc
ggccgcctcgacatctccaagctccgggtcgttgttctcgacgaggccgacgagatgctc
gatctcggcttcaaggaagatctggagctgattctcgacgcgtcgccgaaggaacgccgc
accctgctcttctcggcgaccctgccgcgcgagatcgtccgtctggcccgccagtatcag
cgcgacgcgctccgcatcgacacgatcgaccagagccagccgcatggcgacatcgaatat
cgcgccttccgcgtcgcgccgaacgagatcgacctcgccgtcgtcaacgtgctgcgattc
tacgagcagccggccgccctcgtcttctgctcgacgcgcgagtcggtgaagcgggtccat
gccggcctgcaggagcgcggcttcgaggtggtggcgctctcgggcgagctgagccagacc
gagcgcatgcatgccctgcaggcgctgcgtgacggccgggcgcgcgtttgcgtcgcgacc
gacgtcgccgcgcgtggcctcgacctgcccgatctcggcctggtgatccatgccgaactg
ccgaccggccccgcgatccttctgcaccgttcgggccgtaccggccgcgccgggcgcaag
ggcgtctcggccctgctcgttccgtacacgaatcgcgccaaggcgctccgcctgatcaac
gccgcaggcgtcgatgcctactggaccgccgcgccgtccgccgacgagatccgcgcgaag
gatcaggagcggctgctcgagagcctgctgcgggtcgagcccgcctccgaggaggacgcg
gtgctggttcgcgagctggttggccagcgctccgccgaggagatcgcggccgccctgatc
cgcacctaccgcgcccgcctgccgtcgccggaggatctgttcgatcccggccagcagcag
gaccgtggcccgcgcgattcgaagccgcgccgggacggcccgcgccaggagcgtggcgat
cgcgacgccccgcgcggcgaacgcccgccccgcgcgccgcgcgacaatgacggccagtgg
ccgaccagcggtcccggcagcgagaacggccgcgtcgagcgcccgcagcaggacatggtc
tggttccgcatgagcgtcggccaccagaagaacgccgatcccaagtggctgctgccgctg
atctgccgtcgtggccacgtgaccaagaacgagatcggcgcgatcaagatcttcgagcgc
gacacgcggttcgagatcgcggccgacgcggccgatcgcttcatggtggcgctgcgtcgc
ggcggtgaggaagaaatccgcatcgagccggccgacggcgcgcccgctggcggcgccggt
gcccgtggccccggcaagaagccgacccgtcgcgccggcttcaagccgggcggcaagccc
ggtggcaagcctggcttcaagcccggcttcaagaagcgcgaccgcaacgacggctga
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