Kaistia sp. 32K: K32_23020
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Entry
K32_23020 CDS
T06998
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kai
Kaistia sp. 32K
Pathway
kai03030
DNA replication
kai03430
Mismatch repair
kai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K32_23020 (dnaE1)
03430 Mismatch repair
K32_23020 (dnaE1)
03440 Homologous recombination
K32_23020 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kai03032
]
K32_23020 (dnaE1)
03400 DNA repair and recombination proteins [BR:
kai03400
]
K32_23020 (dnaE1)
Enzymes [BR:
kai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K32_23020 (dnaE1)
DNA replication proteins [BR:
kai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K32_23020 (dnaE1)
DNA repair and recombination proteins [BR:
kai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K32_23020 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
BCP53685
UniProt:
A0A7R7T667
LinkDB
All DBs
Position
complement(2520577..2524038)
Genome browser
AA seq
1153 aa
AA seq
DB search
MSHFARNVGFVHLRVHSAYSLLEGALPLKSLIKLAAADKMPALGLTDTGNLFGALEFSEK
TVEVGIQPIIGCQLSVLFDDGFEPSRRPVAGAKNLSDLVMIAANETGYWNLVRLVSRAFM
ETDAGDKPHIRFEDIAETPEGLIALTGGGAGPLDQAIRAGQGGFAEKRLERMAGLFGDRL
YVELQRHKTIEEQRTEPELVDLAYRHGLPLVATNEAFFPKRDDYEAHDALVAIAEGSVVA
DDKRRRLTPEHYFKSRAEMVELFADLPEATDNSVEIAMRCSYRPMKRKPILPRFAGADAE
PEAAEKAEVAALRDYANRGLEKRLAFHGLAPGLVEKDYWDRLEFELSIIERMKFPGYFLI
VADFIQWAKSQDIPVGPGRGSGAGSLVAWALTITDLDPMRFALLFERFLNPERVSMPDFD
IDFCQDRRGEVIDYVQNKYGAAQVAQIITFGTLQARAVLRDVGRVLQMPYGQVDRLCKMV
PQNPANPVTLAQAIEDEPRLREARDEDPTVAQLLGMAQKLEGLYRHASTHAAGIVIGDRR
LDKLVPLYRDPRSTMPVTQFNMKWVESAGLVKFDFLGLKTLTTLSTAIKLIAKRGIEVDL
AAIPLDDRASYDMLTRGETVGVFQLESQGMRKALMGMRPDRFEDIIALVALYRPGPMDNI
PTYNARKHGEEKPDYYHPLIEVVLKETYGVVIYQEQVMQIAQILSGYSLGEADMLRRAMG
KKIKAEMDAQRDRFVVGAVKQGLTKDHANTIFDMLAKFADYGFNKSHAAAYALVAYQTAY
LKANYPVEFLAASMTLDMGNTEKLNDFRREAMRLGITVELPSVNRSGAVFDVEEGRILYS
LAAVKGVGSQAVEHLVEARAGRPFRDLSDFAARINPRILNKRTLESLICAGALDGFNPDR
ARVMAGVERMMAIGNRVVEGAAIGQDELFGGGGQGETLTLPDVDPWPPSERLQREHAVVG
FYLSAHPLDEYAPILKSLRVQTWAEFSEAVRQGAAAGRLAGTVTTRQERKTRTGNRMGIV
QFSDPTGQFEAVIFSEGLHEYRDRLEPGQSVIVQVGAEDRPEGISVRIVTVKPLDQMTAG
IKQLRVFLRNDEPLKSIERHLAKGRGDGDVSLVLMLDKGKREVEVQLPGRYQLSPQIASA
LRAVNGVVQVELV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatttcgcccggaacgtcggattcgttcaccttagggttcactccgcctattcg
ctgctcgaaggcgcgctgccgctgaagtcgctgatcaagctggcggcggccgacaagatg
ccggcgctgggcttgaccgatacgggcaacctgttcggcgcgctcgaattctcggagaag
accgtcgaggtcgggatccagccgattatcggctgccagctctccgtgctgtttgacgac
ggcttcgagccgtcgcgccggccggtcgcaggcgcgaagaacctctccgatctcgtcatg
atcgccgcgaacgagaccggctactggaatctcgtccgcctggtgtcccgcgccttcatg
gagacggatgcgggcgacaagccgcatatccgtttcgaggatatcgcggagacccccgag
ggcctgatcgcgctcaccggcggcggcgccggtccgctcgaccaggcgatccgggccggg
cagggcggcttcgccgagaagcggctggagcgcatggcggggctgttcggcgaccgcctc
tatgtcgaattgcagcgtcacaagacgatcgaggagcagcggaccgagccggagctggtc
gacctcgcctatcgccatggcctgccgctggtcgcgaccaacgaggcgttcttcccgaag
cgcgacgactacgaggcgcatgacgcgttggtcgccatcgccgagggctcggtcgtcgcc
gacgacaagcgccgccgcctgacgccggagcattatttcaagtcgcgcgccgagatggtc
gagctgttcgccgacctgcccgaggcgacggacaattccgtcgagatcgcgatgcgctgc
tcctaccggccgatgaagcgcaagccgatcctgccgcgcttcgccggcgccgacgccgaa
ccggaggcggccgagaaggccgaggtcgcggcgctgcgcgactacgcgaaccgcggcctc
gagaagcggctcgccttccatggcctcgcgccgggcctcgtcgagaaggattactgggac
cggctcgaattcgagctctcgatcatcgagcgcatgaagttccccggctacttcctgatc
gtggcggacttcatccagtgggcgaagtcgcaggacattcccgtcggtcccggccgtggt
tcgggcgcgggctcgctcgtcgcctgggcgctgaccatcaccgatctcgacccgatgcgc
ttcgcgctgctgttcgagcgcttcctcaatcccgagcgcgtctcgatgccggacttcgac
atcgacttctgccaggaccggcgcggcgaggtcatcgactacgtccagaacaagtatggc
gccgcccaggtggcgcagattatcaccttcggaacgctgcaggcgcgcgccgtgctgcgc
gacgtcggccgcgttctgcagatgccctatggccaggtcgaccggctctgcaagatggtg
ccgcagaacccggccaatccggtgacgctggcgcaggcaatcgaggacgagccgcggctg
cgcgaggcgcgcgacgaggatccgacggtcgcgcagctgctcggcatggcgcagaagctc
gagggcctctatcgccacgcctcgacccacgccgccggcatcgtgatcggcgaccggcgc
ctcgacaagctggtgccgctctaccgcgatccgcgctccaccatgccggtcacccagttc
aacatgaagtgggtcgagagcgcgggtcttgtgaagttcgacttcctcggcctgaagacg
ctgacgacattgtcgacggcgatcaagctgatcgccaagcgcggcatcgaggtcgatctg
gccgcgatcccgctcgacgaccgcgcgagctacgacatgctgacgcgcggcgagacggtt
ggcgtgttccagctggaaagccagggcatgcgcaaggccctgatgggcatgcggccggac
cggttcgaggacatcatcgcgctggtggcgctctatcgcccgggcccgatggacaacatc
ccgacctacaacgcccgcaagcacggcgaggagaagccggactactaccatcccctgatc
gaggtcgtgctgaaggagacctacggcgtcgtcatctaccaggagcaggtgatgcagatc
gcgcagatcctgtccggctattcgctcggcgaagccgacatgctgcgccgcgccatgggc
aagaagatcaaggcggagatggacgcccagcgcgaccgtttcgtcgtcggcgccgtcaag
caggggctgaccaaggatcacgccaacaccatcttcgacatgttggcgaagttcgccgac
tacggcttcaacaagagccacgcggccgcctacgcgctcgtcgcctaccagaccgcctat
ctgaaggcgaactatccggtcgagttcctcgccgcgtcgatgacgctcgacatgggcaat
accgagaagctgaacgacttccgccgcgaggcgatgcgcctcggcatcacggtcgagctg
ccttccgtcaaccgctccggcgcggtcttcgacgtcgaggagggccgcatcctctattcg
ctcgccgccgtgaagggcgtcggcagccaggcggtcgagcatctggtcgaggcaagggcg
gggcggccgttccgcgacctctccgatttcgccgcgcgcatcaacccgcgcatcctgaac
aagcggacgctcgaaagcctgatctgcgccggcgcgctggacggcttcaatccggaccgc
gcccgcgtcatggccggcgtcgaacggatgatggcgatcggcaaccgggtggtcgagggc
gcggcgatcggccaggacgagcttttcggcggcggcgggcagggcgagacgctgactctg
cccgacgtcgatccgtggccgccgtcggaacggctgcagcgcgagcatgccgtcgtcggc
ttctatctgagcgcccatccgctcgacgaatatgcgccgatcctgaagagcctgcgcgtg
cagacctgggcggagttttccgaggccgtccgtcagggtgccgccgccggccgcctcgcc
ggcacggtgacgacgcggcaggagcgcaagacgcgcaccggcaaccgcatgggcatcgtc
cagttctccgatccgaccgggcagttcgaggcggtgatcttctccgagggtctgcacgaa
tatcgcgaccggctggagcccggccagtcggtgatcgtgcaggtcggcgccgaggatcgc
cccgaaggcatcagcgtgcgtatcgtcacggtgaagccgctcgaccagatgaccgccggc
atcaagcagctccgcgtcttcctgcgcaatgacgagccgctgaagagcatcgagcggcat
ctggcgaagggcaggggcgacggcgacgtcagcctggtgctgatgctcgacaagggcaag
cgcgaggtcgaggtccagctccccggccgctaccagctctcgccccagatcgccagcgcg
ctccgcgccgtgaacggcgtcgtgcaggtcgagctggtttag
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