Kaistia sp. 32K: K32_27290
Help
Entry
K32_27290 CDS
T06998
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kai
Kaistia sp. 32K
Pathway
kai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K32_27290 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kai03021
]
K32_27290 (rpoA)
03400 DNA repair and recombination proteins [BR:
kai03400
]
K32_27290 (rpoA)
Enzymes [BR:
kai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K32_27290 (rpoA)
Transcription machinery [BR:
kai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K32_27290 (rpoA)
DNA repair and recombination proteins [BR:
kai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K32_27290 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BCP54112
LinkDB
All DBs
Position
complement(2938942..2939958)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPNKLEVTPGSDPKRLATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
AVQIDGVLHEFSSIAGVREDVTDVILNIKEISIKMQGEGPKRMVVRKTGPGVVTAGDIQT
VGDIEILNPELVLCTLDEGAEIRMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSIYSPVK
KVSYRVENTREGQVLDYDKLTLSVETDGSLRPDDAVAYAARIVQDQLSIFVNFEEPQKET
VSEAIPELAFNPSLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVTNWPPENIEELAKRYEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccataagaattggcaagagctgatcaagccgaacaagctcgaggtgacgccgggt
tccgatcccaagcgtctcgccactgtcgtggcggagcctcttgagcgcggcttcggtctg
acgctcggcaacgcgctgcgccgcgtgcttctgtcttcgctccagggcgccgcggtcacc
gccgtccagatcgacggcgttctgcacgagttctcgtcgattgccggcgtccgggaagat
gtcaccgacgtcatcctgaacatcaaggaaatctccatcaagatgcagggcgaaggcccg
aagcgcatggtggttcgcaagacgggtccgggcgtcgtcaccgctggtgacatccagacc
gtcggcgatatcgagatcctgaaccccgagctggtcctgtgcaccctcgacgagggcgcc
gagatccgcatggagttcacggtgaataccggcaagggctacgtcccggccgaccgcaac
cgcgccgaagacgcgccgatcgggctcatcccggtcgacagcatctattcgccggtcaag
aaggtctcgtaccgcgtcgagaacacccgcgagggccaggttctcgattatgacaagctg
acgctttcggtcgagaccgacggctcgctccgtcccgacgacgcggtggcctacgccgcc
cgcatcgtccaggaccagctgtcgatcttcgtcaatttcgaagagccgcagaaggagacc
gtttcggaagcgattccggagctcgccttcaacccgtcgcttctgaagaaggtggacgaa
ctggaactttccgtccgttcggccaattgcctgaagaacgacaatatcgtctatattggc
gacctgattcagaagaccgaggcagagatgctccggaccccgaatttcggccgcaagtcg
ctcaacgagatcaaggaagttctcgcccagatgggtctccatctcggcatggaggtcacc
aattggccgccggagaacatcgaagagctcgccaagcgctacgaagatcattactga
DBGET
integrated database retrieval system
