Kaistia sp. 32K: K32_30260
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Entry
K32_30260 CDS
T06998
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kai
Kaistia sp. 32K
Pathway
kai03420
Nucleotide excision repair
kai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K32_30260 (pcrA)
03430 Mismatch repair
K32_30260 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kai03400
]
K32_30260 (pcrA)
Enzymes [BR:
kai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K32_30260 (pcrA)
DNA repair and recombination proteins [BR:
kai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K32_30260 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K32_30260 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
AAA_22
Myosin_N
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BCP54409
LinkDB
All DBs
Position
3233189..3235540
Genome browser
AA seq
783 aa
AA seq
DB search
MTVPFDSSAPAPRPGGIAARALGRAAAPDYVARLNPEQRLAVETTEGPVLVLAGAGTGKT
RVLTTRIAHLLATQKAYPSQILAVTFTNKAAREMRHRIGELIGPSVEGMNWLGTFHSIGV
KILRRHAELVGLRSDFTILDTDDQIRLMKQVIQAENIDEKRWPARQLANLIDSWKNRGLT
PADVPPGDGGSFADGRGIKLYRDYQARLKTLNACDFGDLLLENLRLFREHPDVLRDYHQR
FHYMLVDEYQDTNVAQYLWLRLLAQGRKNICCVGDDDQSIYGWRGAEVDNILRFEKDFPG
AVVIKLERNYRSTSHILGAASHLITHNEGRLGKTLFTDATDPDAARVRVASAWDSEEEAR
AVGEEIESLQRQGHKLNDMAILVRASFQMRSFEERFVTIGLNYRVIGGPRFYERQEIRDA
LAYLRVVAQPADDLAFERIVNVPKRGIGETTVRLLHDHARARNIPILQATDELIQTEEIK
SSKTRTALRDLLASFALWRSKLDQMKHGELAEMILEESGYTEMWQQDRSADAPGRLENLK
ELIRSMEEFESLAGFLEHIALVMDTDRAENQDAVSIMTLHSAKGLEFETVFLPGWEEGLF
PHQRSLDESGRAGLEEERRLAYVGITRAKKRAMIWFSSNRRIHGLWQSNVPSRFLDELPE
KHVEVIEQTSSYGGYNVGGVGNYGASRFDRADSFNNTYSTPGWQRAQANKASAQAHARSA
PRQIEGELVAKSTGSASKYKLGERVFHQKFGYGAIVEIEGNKLTVDFEKTGTKKVVDSFV
TKH
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcccttcgatagttccgcccccgccccgcgccccggcggcatcgctgcgcgc
gcgctcggccgggctgccgcccccgactatgtcgcgcgcctcaatcctgagcagcgcctc
gcggtcgagacgacggaagggccggttctcgtgctcgccggcgccggcaccggcaagacg
cgcgtgctgacgacgcgcatcgcccacctgcttgcgacccagaaggcctatccgagccag
atcctcgccgtcaccttcaccaacaaggcggcgcgcgagatgcgccaccgcatcggcgag
ctgatcggcccctcggtcgagggcatgaactggctcggcacgttccactcgatcggcgtc
aagatcctgcgccgccatgcggaactcgtgggcttgcgctccgacttcaccattctcgac
accgacgaccagatccgcctgatgaagcaggtgatccaggccgagaacatcgacgagaag
cgctggccggcgcggcagctcgccaatctgatcgacagctggaagaaccgcggcctgacg
ccggccgacgtgccgccgggcgatggcggctcctttgccgacggccgcggcatcaagctc
taccgggactaccaggcacgcctgaagacgctgaacgcctgcgatttcggcgatctgctg
ctcgaaaacctgcgcctgttccgcgagcatccggacgtgctccgggactatcaccagcgc
ttccactacatgctggtcgacgagtaccaggacaccaacgtcgcgcagtatctctggttg
cgtctgctggcgcagggccgcaagaacatctgctgcgtcggcgacgacgaccagtcgatc
tatggctggcgcggcgccgaggtcgacaacatcctccgcttcgagaaggatttcccgggc
gccgtcgtcatcaagcttgagcgcaattatcgctcgacctcgcacatcctcggcgctgcc
tcgcacctcatcacccacaatgagggccggctcggcaagacgctgttcaccgacgcgacc
gacccggacgccgcccgcgtccgcgtcgcctcggcctgggattcggaggaagaggcccgc
gccgtcggcgaggagatcgagagcctgcagcgccagggccacaagctcaacgacatggcg
atcctggtgcgcgcctcgttccagatgcgctccttcgaagagcgcttcgtcacgattggc
ctcaactaccgcgtcatcggcggcccgcgcttctacgagcggcaggaaatccgcgacgcc
ctcgcctatctgcgcgtcgtcgcgcagccggccgacgaccttgccttcgagcgcatcgtc
aacgtgccgaagcgcggcatcggcgagacgacggtccgcctgctgcacgaccatgcgcgg
gcccgcaacatcccgatcctccaggcgaccgacgagctgatccagacggaggagatcaag
tcgtcgaagacgcgcaccgcgctgcgcgatctcctcgcttcgttcgcgctctggcgctcg
aagctcgaccagatgaagcatggcgagctggccgagatgatcctggaggagagcggctac
accgagatgtggcagcaggacagatcggccgacgcgccgggccggctggaaaacctcaag
gagctgatccgctcgatggaggagttcgagtcgctcgccggcttcctcgagcatatcgcc
ctcgtcatggacaccgaccgcgccgagaaccaggacgcggtctcgatcatgacgctgcac
tcggccaagggcctcgaattcgagaccgtcttcctgccgggctgggaggaaggcctgttc
ccgcaccagcgctcgctcgacgagagcggccgcgccggcctggaggaagaacgccgtctc
gcctatgtcggcatcacccgcgccaagaagcgcgccatgatctggttctcctcgaaccgc
cgcatccatggcctctggcaatcgaacgtgccgtcgcgcttcctcgacgaactgccggaa
aagcatgtcgaggtgatcgagcagacgtcgagctatggcggctacaatgtcggcggcgtc
ggcaattacggcgccagccgcttcgaccgcgccgacagtttcaacaacacctattcgacc
cccggctggcagcgcgcccaggcgaacaaggcatccgcccaggcgcatgcccgttcggcg
ccgcgccagatcgaaggcgagctggtggcgaaatcgaccggctccgcgtcgaaatacaag
ctcggcgagcgggtcttccatcagaagttcggctatggcgccatcgtcgagatcgagggc
aacaagctgaccgtcgatttcgagaagaccggcaccaagaaggtcgtcgacagttttgtg
accaagcactag
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