KEGG   Kaistia sp. 32K: K32_44070
Entry
K32_44070         CDS       T06998                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kai  Kaistia sp. 32K
Pathway
kai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K32_44070 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kai03021]
    K32_44070 (rho)
   03019 Messenger RNA biogenesis [BR:kai03019]
    K32_44070 (rho)
Transcription machinery [BR:kai03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     K32_44070 (rho)
Messenger RNA biogenesis [BR:kai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     K32_44070 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT OB_RNB AAA_22 S1CSD-TOTE-2 DnaB_C
Other DBs
NCBI-ProteinID: BCP55790
LinkDB
Position
complement(4761550..4762815)
AA seq 421 aa
MREMKLQDLKSKSPTELLAFAEELEVENASTLRKQELMFAILKQLADNDVEIVGQGVVEV
LQDGFGFLRSPDANYLAGPDDIYVSPSQIRRFSLRTGDTVEGYIRSPKDGERYFALLKVS
TINFEDPDKARHKVHFDNLTPLYPNERFKMELEVPAGKDMTPRIIDLVAPLGKGQRALVT
APPRTGKTVFLQNIAHSIAQNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAT
RHVAVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVADKRTFPA
IDITRSGTRKEELLVPPDVLKKMYVLRRILMPMGTVDAIEFLLDKLRQTKHNSDFFDQMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgtgaaatgaaactgcaggacctcaagtccaaatccccgacggagctgctggccttc
gccgaggaacttgaggtcgaaaatgcgagcacgctgcgcaagcaggagctgatgttcgcg
atcctgaagcagctggcagacaacgacgtcgagatcgtcggacagggcgtcgtcgaggtt
ttgcaggacggtttcggcttcctgcgctcgcccgacgccaactatctcgccggacccgac
gatatctacgtctctccctcgcagatccgccgcttctcgctgcggaccggcgacacggtc
gagggctatatccgcagtccgaaggatggcgagcgctatttcgccctgctcaaggtctcg
acgatcaatttcgaggaccccgacaaggcgcgccacaaggtccacttcgacaatctgacg
ccgctctatccgaacgagcgcttcaagatggagctcgaggttccggccggcaaggacatg
acgccgcggatcattgacctcgtcgcgccgctcggcaaaggccagcgcgccctggtcacg
gcgccgccgcgcaccggtaagacggtgttcctgcagaacatcgcccactcgatcgcccag
aaccatcccgagtgctacctcatcgttctcttgatcgacgagcgtccggaagaagtgacg
gacatgcagcgctcggtgaagggcgaggtgatctcctcgaccttcgacgaacccgccacc
cgccacgttgccgtcgccgagatggtgatcgagaaggccaagcgtctcgtcgagcatggc
cgcgacgtcgtcatcctgctcgattcgatcacccgcctcggccgcgcctacaacacggtc
gtgccgtcctccggcaaggtgctgaccggcggtgtcgacgccaatgcgctgcagcggccg
aagcgcttcttcggcgcggcgcgcaatatcgaggaaggcggttcgctgacgatcatcgcg
accgcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggtaactcggaaatcatcctggaccgcaaggtggccgacaagcggaccttcccggcg
atcgacatcacccgctcgggtacccgcaaggaagagctgctggttccgccggatgtgctc
aagaagatgtacgtgctccgtcgcatcctcatgccgatgggcaccgtcgacgcgatcgag
ttcctgctcgacaagctccggcagacgaaacacaactccgatttcttcgatcagatgaac
acctga

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