Ketobacter alkanivorans: Kalk_03470
Help
Entry
Kalk_03470 CDS
T05294
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kak
Ketobacter alkanivorans
Pathway
kak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Kalk_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_03470
DNA repair and recombination proteins [BR:
kak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Kalk_03470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Kalk_03470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUM11532
UniProt:
A0A2K9LGY5
LinkDB
All DBs
Position
complement(855886..857898)
Genome browser
AA seq
670 aa
AA seq
DB search
MKKFKVHSKYKPAGDQPAAIAQLVEGLNDGLSHQTLLGVTGSGKTFTVANVVEQVQRPTL
VMAHNKTLAAQLYGEFKDFFPDNAVEYFVSYYDYYQPEAYVPASDTFIDKDSSINEHIEQ
MRLSATKALLEREDVLIVATVSAIYGLGDPGSYLNMVLHLDRGEQIDQRKIVRRLAELQY
TRNDLEFNRATYRVRGEVIDVFPAESEREALRIELFDDEVENLSLFDPLTGEVLQKIPRY
TIYPKSHYVTPRETVVGAIENIKLELHDRLEFYSNEGKLLEHQRLSERTRFDIEMMQELG
YCTGIENYSRYLSGRAPGEPPPTLFEYLPDNALVVIDESHVTVPQVGGMYRGDRSRKETL
VQYGFRLPSALDNRPLKFEEWEALCPQTIFVSATPGNYEAEHQQAIVEQIVRPTGLVDPE
IEVRPALTQVEDLLSQIHATVAKQERVLVTTLTKRMAEDLTDYLMEHGVRVRYLHSDIDT
VERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVTILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYGDKITNSMQRAIDETARRRAKQVAFNEANGITPIGIKKSVEDIMEGARA
PGSLRKAGRKVADKKSDTGRDLATMQPRQVAALIKDLEQQMFEAAKNLKFEEAARLRDEV
QEIKSQAFIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagttcaaggttcactccaagtataagccagcgggtgaccagcccgctgccatt
gctcagttggtggaaggcctgaatgacggcctttcccatcagacattgctgggggtgacc
ggctccggcaaaacctttacggttgccaatgtggtggagcaggttcagcgccccacactg
gtgatggctcacaataaaaccctggccgcacagctgtatggagagtttaaagacttcttt
cctgataatgcggtggagtattttgtttcctattacgattattaccagcccgaagcctac
gtacccgcatccgacacctttatcgacaaagattcctccattaatgagcatatcgagcag
atgcggctgtctgccaccaaggctttgttggagcgggaagacgtcctgatagtggccacc
gtgtccgctatctatggtttgggcgatcctggtagttaccttaatatggtgctgcatctg
gatcgtggtgagcagattgatcaacgtaagattgtgcgtcgcctggccgaacttcagtac
acccgcaacgacctcgaattcaaccgcgccacctatcgtgtgcgaggtgaggttattgac
gtgtttcccgcagaatcggagcgagaggcactgcgtattgagttgttcgacgatgaagtg
gaaaacctgtccctgttcgatccgctgaccggagaggtgttgcagaagatcccccgatac
acgatctacccgaaatcacactacgtgacgccccgtgaaacggtggttggtgccattgag
aacatcaagcttgagttacacgataggctcgagttctattccaatgaaggcaaattgctg
gagcatcaacgtttgagtgagcgcactcgctttgatatcgaaatgatgcaagagcttgga
tactgcaccggcatcgaaaactattcccgctatctttctggccgggcacctggcgagcca
ccgccaaccctgttcgaatacctgccagacaacgctctggtggtgattgacgagtcacac
gtaaccgtccctcaggtaggcggaatgtatcgtggtgaccgatcacgcaaggaaacgctg
gttcaatatggttttcgactgccttctgctttggataatcgcccactgaaatttgaagaa
tgggaggccttgtgccctcagactatttttgtgtccgccaccccaggcaattacgaggcg
gagcatcagcaagctattgttgaacagatcgtgcggcccaccgggttggtggatcctgaa
atcgaagtgcggcctgcgctgactcaggtggaagacctgttgtctcagatacacgccaca
gtagccaagcaagagcgtgtgctggttacaaccctaaccaagcgtatggcggaggatctg
accgactatcttatggagcatggggtgcgagtccgctatttgcattccgatattgacacc
gtagagcgggtggagatcattcgcgatctgcggttgggggagttcgatgtgcttgtgggc
atcaacttgctgcgtgaggggctggatatgccagaggtgtctttggtcaccattctcgat
gcggataaagaaggatttctgcgctcagaacgctccctgatacagaccattgggcgagca
gcccgtaatctgaatggcaaagccatcctgtatggggataaaataacgaactccatgcag
cgcgccatcgacgaaaccgcccgccgcagagctaaacaggttgccttcaatgaagccaat
ggcataacgcccatcggcatcaaaaagtccgttgaagacatcatggaaggggccagggct
cccggtagtctgcgtaaggctggccgtaaggttgcggataagaaatccgatactggtcga
gatttggccactatgcagcctcgacaggtagccgcgctgataaaagatttggaacaacaa
atgttcgaagcggcaaaaaatctcaaatttgaagaggctgcccgcctcagagacgaagtg
caagagatcaagagtcaggcgttcatcagttag
DBGET
integrated database retrieval system
