Ketobacter alkanivorans: Kalk_03995
Help
Entry
Kalk_03995 CDS
T05294
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
kak
Ketobacter alkanivorans
Pathway
kak02020
Two-component system
kak02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Kalk_03995
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Kalk_03995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
kak02022
]
Kalk_03995
02035 Bacterial motility proteins [BR:
kak02035
]
Kalk_03995
Two-component system [BR:
kak02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Kalk_03995
Bacterial motility proteins [BR:
kak02035
]
Flagellar system
Flagellar assembly proteins
Others
Kalk_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
MCM
AAA
AAA_19
AAA_2
Mg_chelatase
HTH_28
FleQ
AAA_16
AAA_PrkA
AAA_7
nSTAND3
HTH_23
AAA_3
HTH_24
HTH_11
MerR
Sigma70_r4_2
AAA_22
HTH_20
AAA_18
PCDH15_12th
NB-ARC
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AUM11630
UniProt:
A0A2K9LHB4
LinkDB
All DBs
Position
complement(964965..966308)
Genome browser
AA seq
447 aa
AA seq
DB search
MNTLNVLVVEDDSDLREAIMDTLDVSGFSVDGVGNGEAALEWLRKDQCQLVISDVNMPGI
SGYQLMREIATDWPQLPVLIMTAYGSISNAVEAIRNGAVDYLEKPFTTEKLVSVVERYVR
VEIDDQEPVAEDIETKKVFQLANKVAQTDSSVMIMGESGTGKEVLARYIHKHSPRCGKPF
VAINCAAIPENMLEATLFGHEKGAFTGAYQSSAGKFEQANGGTLLLDEISEMDINLQAKL
LRVLQEKEVERIGGKKAIQLDVRVLATTNRNLRAQVEAGKFREDLYYRLCVFPLMWKPLR
ERRDDIIPLARRMIAMKQAQGMVQLDATAELALIQHEWPGNIRELDNVIQRALILCSNDV
ITADDIFIPDAAMNNASELVMDSDADLGSALGEDLKKREFELIIDTLRNVGGSKKQTAEK
LGISPRTLRYKLARMREYGIDVERVYA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattaaatgtattggtagtagaggacgattctgatctgcgtgaagcaattatg
gacacgcttgatgtttccggattttcagttgatggcgttggtaatggtgaggccgccctg
gaatggttgcgtaaggatcaatgtcagttggttatctccgatgtcaatatgccgggcatc
agcggttatcagttgatgcgtgaaatcgcgacagattggcctcagcttccagttctcatt
atgaccgcctatggcagcatttcaaatgcggtggaagcgattcgcaatggtgcggtggac
tatctagagaagccttttacgacggaaaaattagtttcagttgtggagcgctatgtgcga
gttgagatcgatgatcaggaacctgtcgctgaagacatcgaaaccaaaaaagtattccag
cttgccaataaagtggcccaaaccgattccagcgtcatgatcatgggtgagagtgggacg
ggtaaagaggttctggctcgatatatccataaacattcacctcgttgcggtaaacctttt
gttgccataaattgcgcggccattccagaaaacatgctggaggcgaccttgtttggccat
gaaaagggcgctttcaccggagcctaccagagcagtgccggtaagtttgaacaggctaat
ggtggcacattgttgctggacgaaatatccgagatggatatcaacctgcaggccaagttg
ctacgtgttcttcaggaaaaggaagtggagcgaattggcggcaagaaggcgattcagtta
gatgttcgggttctggccaccaccaaccgcaatttacgggcccaggtcgaggcaggtaag
tttcgcgaagatttatattacagattatgtgtgtttcctcttatgtggaaacccttgcga
gagcgtcgggatgacattatccctctggcaaggcgcatgatagctatgaagcaggctcaa
gggatggtgcagctcgacgcgactgcagagctggcactgattcagcatgagtggccagga
aatattcgtgagctggataatgttattcagcgggctctaatactttgtagcaatgatgtg
attacggctgacgatatatttatcccagatgcagcaatgaataatgcgtctgaactggta
atggactctgatgcagatctgggtagtgcccttggtgaggatcttaagaagcgtgagttc
gagctgattatcgacactttgcgcaatgtcggcggtagcaaaaagcaaacggcggaaaag
ttgggaattagtccgcgtacattacgctacaagctggcgcgcatgcgtgaatatggcata
gatgttgaaagggtgtatgcataa
DBGET
integrated database retrieval system
