Ketobacter alkanivorans: Kalk_04515
Help
Entry
Kalk_04515 CDS
T05294
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03030
DNA replication
kak03430
Mismatch repair
kak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Kalk_04515
03430 Mismatch repair
Kalk_04515
03440 Homologous recombination
Kalk_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kak03032
]
Kalk_04515
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_04515
Enzymes [BR:
kak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Kalk_04515
DNA replication proteins [BR:
kak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Kalk_04515
DNA repair and recombination proteins [BR:
kak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Kalk_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
HTH_58
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AUM11726
UniProt:
A0A2K9LH82
LinkDB
All DBs
Position
complement(1073203..1076670)
Genome browser
AA seq
1155 aa
AA seq
DB search
MTQPFVHLRIHSEYSLVDGLVRIKPLAKLCSEMNMPALALTDFCNMFALVKFQRSAMDAG
LKPIYGADVLLESAQPDEPPTQIVLLAKSLQGYRNLTELVSESYLHGQKLDKAIIARDYL
RQKTDGLICLSGGRQAEIGRALLGGKHDKVEQLLAEYSELFPDSFYLELHRTSRQDDETY
LHLAVDVAQKFNLPVVATNDVRFLKRDDFEAHETRVCIYEGWTLEDPSREQRYSEEQYLK
SPEEMCELFQDIPEAIENTVEIAKRCSFEIPLGTYFLPDYPVPEGMTLDDFIIAESRKGL
EQRLAFLYDVNDPGFAEIRKPYDERLQSELDVIIQMGFPGYFLIVADFIQWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGSMAAKAVVRDVGRVQGRSYGFVDRIAKLIPFEVGMTLSKAIEQEP
QLQELYDRDEDVRELLDMALKLEGITRNVGKHAGGVVIAPSALTDYVPLYCDEHGNNLVT
QFDKDDVEAAGLVKFDFLGLRTLTIVDWALKTINPVLEKQGEPPVDIERIPLDDQASFDL
LQRAETTAVFQLESRGMKDLIKRLKPNTFEDIVALVALFRPGPLGSGMVDDFIARKHGRQ
KVDYPHPDLKPVLDTTYGTILYQEQVMLIPQVLADFTLGGADLLRRAMGKKKADVMAQQR
GLFVDGAAKNGIDPKLSGEIFDTMEEFAKYGFNKSHSAAYALVSYQTAWLKAHYPAGFMA
AVLSADMHNTDKVVTLIDECRRMKLAIVSPDVNVSEYKFTVGEQEQVVYGLGAIKGLGEG
PIEAILEARDANKPFKNLFEFCRRVDLKKLNKRSMEALVRAGALDKLGPDRATLMASLQE
AMRYAEQESKNQDLGIMDMFGAVEEEEQPEPEWAKVKPWSDDERLNGEKDTLGLYLTGHP
IDQYLEEISHFISCRIADVKPGNTKESRSIVAGLVIAQRVMKNKRGDKMAFLTLDDKSGR
LEISIFSDTYEEYKDQLIKDAVLVVEGDVSMDDYSGGLKMVTRKVFGIAQARENYARLIS
LDIDQSRVGPEFSQQLQAALTPYREGGCKVRIQYARQGAHGRLYLGDDWRISPKPELIKQ
LEQLCGERTLTVHYR
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccattcgtacatctgcgtattcattctgaatattcactggtggatggactg
gtgcgtattaagccgttggcgaaattgtgttctgaaatgaatatgccagccttggctctt
acggatttctgcaacatgttcgccctggtgaagtttcagcggtctgccatggatgcgggg
ctcaaacccatttacggcgcagacgtactgcttgaatcagcccagcccgatgagccgcca
acccagatcgtattgctcgccaaaagcttacaaggttatcgcaacctgactgaactggtg
tctgaatcttatctacatggccaaaagctcgacaaagcaattattgcccgtgactacctg
cgacaaaaaacagatggcttgatctgtttgtccggtggcaggcaagccgaaatcggtcgt
gcattactaggggggaagcacgacaaagtcgagcagctgcttgcagagtacagcgagctg
tttcctgattcgttttatttggagcttcaccgtacctcgcgtcaggatgatgaaacctat
ttgcaccttgctgtagatgtcgcgcagaagttcaacttgccggtggtggcgaccaacgat
gtccgttttctgaaacgggatgactttgaagcccacgaaacccgcgtctgtatatacgag
ggttggacactggaagaccccagtcgtgagcaacgctacagtgaagagcagtatctgaaa
tcccccgaagagatgtgtgagctgtttcaggacatccctgaggccatcgaaaacacggtt
gagatagcgaagcgctgcagttttgagatccccctgggcacctatttcctgccggactac
ccagtgcctgaaggcatgacgttggacgactttatcatcgccgaatcccgcaaggggctc
gagcaacgcctggcctttctgtatgacgtgaatgatcctgggtttgccgaaatccgcaaa
ccttatgatgagcgtttgcagagtgagttggatgtaatcattcagatggggtttcctggg
tacttcctcattgttgcggactttatccaatgggccaaaaacaatggtgtgccggtgggg
ccggggcggggctccggcgcaggctctctcgttgcctacgtgctgaaaataaccgacctc
gatccattggaatacgatctgctgttcgaacggtttctcaaccctgagcgggtatccatg
cccgatttcgacgttgacttttgtatggacggtcgtgatcgtgttatcgattatgtggcc
gaaaaatatggtcgtaatgcggtcagccagatcattacattcggttcgatggcggcaaaa
gcggtagtgcgcgatgttgggcgagtacaaggtcgatcctacggtttcgtggatcgtatt
gccaaactgattccctttgaagtcggtatgacactcagcaaagccatagagcaggagccc
cagctgcaagaattgtacgatcgcgatgaggacgtccgtgaactgctggacatggccctc
aagctggaaggtattacccgtaacgtgggtaagcacgccggaggtgtggtcattgcgcct
tctgcccttacggattacgtgcctctctattgcgatgaacacggtaacaacctggttacc
cagtttgataaagacgatgtggaagcagcgggcttggtgaagttcgatttcctcggcctg
cgcacgttgaccatcgtggactgggccctgaaaaccatcaatcctgtattggaaaagcag
ggcgagccaccggtagacattgagcgaattccgctcgatgaccaagcttcttttgacctg
ctgcaaagagccgagaccaccgccgtattccagctggaatcacggggtatgaaagatctg
ataaaacgcctcaaacctaacaccttcgaagacatcgtcgcgttggtggccttgtttcgt
cctggccctctgggttctggcatggtggatgactttatcgcccgaaagcatgggcggcaa
aaggtagattacccccaccccgatctgaagcctgttctggataccacctacggcaccatt
ctgtatcaggaacaggtgatgctgattccccaggtgctggcagattttactctgggcggc
gctgatttgttgcgtcgtgctatgggtaaaaagaaagccgacgttatggcccagcaacgg
ggtttgtttgtggatggtgctgccaagaatggcatcgaccctaaactttcaggcgaaatc
ttcgacaccatggaagagttcgccaagtacggctttaacaaatcccactccgctgcctat
gcactggtgtcgtatcagacagcttggctcaaggcccattatccagctggttttatggcc
gcggtgctgtctgccgatatgcacaacaccgacaaagtggtgacgttgattgatgaatgt
cgtcgcatgaaactggctattgtgtcgccggatgtgaacgtcagtgagtacaagtttaca
gtgggtgagcaagagcaggttgtgtacgggttaggcgcaatcaaaggattgggggagggc
cccatcgaggctatcctggaggcccgcgacgctaataagcccttcaaaaacttgtttgag
ttctgccgcagagtcgatctgaaaaaactcaataagcgctctatggaagccttggtgcgt
gccggcgcattggacaagctggggccagaccgcgccactcttatggccagcctgcaggag
gccatgcgttacgccgagcaggaaagtaaaaaccaggatcttggcatcatggacatgttc
ggtgctgtggaagaagaggagcagcccgaacccgagtgggccaaggtcaaaccctggagt
gatgatgagcgtcttaacggcgaaaaagatacccttggcctgtatctgaccggacaccct
atagatcagtatctagaggagatttcccactttatctcttgtcggatcgccgatgtgaaa
ccaggtaacactaaagagtcgcgctccatcgtggccgggctggtgattgctcagcgggtc
atgaaaaacaaacgcggcgacaaaatggcattcttgacgttggatgacaagagcgggcgt
ttggaaatatccatcttctctgatacctatgaagaatataaggatcagcttatcaaagat
gcggtactggtggtggaaggggatgtcagcatggatgactactccggcggcctgaaaatg
gtaacccgcaaagtctttggtatcgctcaagcgcgggaaaactacgcccgtttgatcagt
ttagacatcgaccagtcccgagtagggccagagttcagccaacaattgcaggctgccctg
acaccctatcgcgaaggcggctgcaaggtccggattcagtatgcccgtcagggtgctcat
ggacgcctatacctgggggacgactggcgtatttcccccaagccggagcttataaaacaa
ttagagcagctgtgtggtgagcgaaccctgacagtgcattatcgctga
DBGET
integrated database retrieval system
