Ketobacter alkanivorans: Kalk_04960
Help
Entry
Kalk_04960 CDS
T05294
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kalk_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_04960
Enzymes [BR:
kak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Kalk_04960
DNA repair and recombination proteins [BR:
kak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kalk_04960
Prokaryotic type
Kalk_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUM11808
UniProt:
A0A2K9LHG6
LinkDB
All DBs
Position
complement(1169847..1170533)
Genome browser
AA seq
228 aa
AA seq
DB search
MSPDQVKIEPSWKQHLLPEFQQPYMTTLREFLLEQKKAGKVIFPKGEEYFNAFNLTPFDQ
VKVVIIGQDPYHGPGQAHGLCFSVQDGVALPPSLQNIYKEIHADLGLPIPKTGNLTHWAQ
QGVLLLNAVLTVEQSKAAAHQGKGWELFTDAAIRELNEQREGIVFLLWGSYAQKKGQIID
PKKHCVLKTVHPSPLSAYRGFFGCKHFSKANAYLESIGAMPIDWSVPE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggatcaagtgaagatcgaacccagttggaagcagcatttgctgcctgagttt
cagcagccgtatatgacgacgttgcgtgagttcttactggagcagaaaaaggcaggaaag
gtcatattcccaaaaggggaagagtattttaacgcctttaatctaacgccgtttgatcaa
gtgaaagtcgtgatcattggtcaggacccctatcatgggccgggtcaggcccatgggtta
tgcttttcggtacaggatggggtggcgctgccgccttctttgcagaatatctataaagag
attcatgctgatcttggtttgccgattcccaaaaccgggaacctcacccactgggctcag
caaggggtgttgttgctgaatgctgtgcttactgtagagcaatcaaaggccgcagcacat
cagggtaagggttgggagttgttcactgatgcggcaattagagagttaaatgaacagcgt
gagggtatcgtgtttttgttgtggggcagttatgcccaaaagaaagggcagatcattgat
ccgaagaagcactgtgtgttgaagacagttcacccatcacccctttcggcctatcgaggc
ttttttggctgtaaacatttctccaaggcgaatgcttatctggaatccattggtgcaatg
cccattgattggtctgtccctgagtag
DBGET
integrated database retrieval system
